- From: Michel Dumontier <michel.dumontier@gmail.com>
- Date: Tue, 9 Dec 2014 10:36:17 -0800
- To: Vladimir Mironov <vladimir.n.mironov@gmail.com>
- Cc: w3c semweb hcls <public-semweb-lifesci@w3.org>
Hi Vladimir, Can you elaborate with a definition for 'isAtomicPartOf'? Is this already defined in a vocabulary? m. Michel Dumontier Associate Professor of Medicine (Biomedical Informatics), Stanford University Chair, W3C Semantic Web for Health Care and the Life Sciences Interest Group http://dumontierlab.com On Tue, Dec 9, 2014 at 12:33 AM, Vladimir Mironov <vladimir.n.mironov@gmail.com> wrote: > Hi, > > how about 'isAtomicPartOf'? > > Vladimir > > On 8 December 2014 at 18:04, Michel Dumontier <michel.dumontier@gmail.com> > wrote: >> >> Hi all, >> On the call today we discussed the issue [1] of linking a symbol in >> a triple (e.g. a subject, a predicate, *or* an object) to a dataset. >> The use case for this is twofold : to provide a direct link between >> data items and their datasets in a Linked Data manner, and to survey >> the use of data items across datasets. While we agreed that using a >> relation such as dc:isPartOf is fairly natural to link the triple >> itself to the dataset, it is much less clear for linking the >> components to the dataset. In Bio2RDF we used void:inDataset, but the >> domain of this relation is a foaf:Document, so it muddies the >> semantics by entailing a possible disjoint type with whatever the >> subject has been typed with (e.g. protein, disease, etc). >> >> We discussed the suitability of existing vocabularies, but none, to >> our knowledge, clearly fit the situation. For instance, can >> dc:isPartOf (http://purl.org/dc/terms/isPartOf) be used as a logical >> partition of the dataset with the data item? or is SIO's refers to >> (http://semanticscience.org/resource/refers-to) potential suitable, if >> not somewhat vague? >> >> We welcome your thoughts on the matter. Do you know of a suitable >> relation? Should we consider some new relation such as utilizes / >> is-utilized-in or is-data-item-in / has-data-item? >> >> Cheers! >> >> m. >> >> [1] https://github.com/joejimbo/HCLSDatasetDescriptions/issues/90 >> >> Michel Dumontier >> Associate Professor of Medicine (Biomedical Informatics), Stanford >> University >> Chair, W3C Semantic Web for Health Care and the Life Sciences Interest >> Group >> http://dumontierlab.com >> >
Received on Tuesday, 9 December 2014 18:37:05 UTC