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Re: Ontology for Somatic Mutations?

From: Suzanna Lewis <suzi@berkeleybop.org>
Date: Mon, 22 Jul 2013 19:22:37 +0200
Cc: Oliver Ruebenacker <curoli@gmail.com>, Karen Eilbeck <keilbeck@genetics.utah.edu>, SO developers <song-devel@lists.sourceforge.net>, public-semweb-lifesci <public-semweb-lifesci@w3.org>, jennifer.warrender@newcastle.ac.uk
Message-Id: <F42BB42C-4B73-477E-8557-614774E8150B@berkeleybop.org>
To: Phillip Lord <phillip.lord@newcastle.ac.uk>
Check out the  Sequence Ontology. It is well-established in the genomics community.  
http://sequenceontology.org/

On Jul 22, 2013, at 4:53 PM, Phillip Lord <phillip.lord@newcastle.ac.uk> wrote:

> 
> We are working on a karyotype ontology which describes chromosome abnormalities.
> 
> The first paper is available here which also includes links to the ontology.
> 
> http://arxiv.org/abs/1305.3758
> 
> 
> 
> 
> Oliver Ruebenacker <curoli@gmail.com> writes:
> 
>>     Hello,
>> 
>>  Does any one know of an ontology for somatic mutations (including SNPs,
>> chromosomal abnormalities, etc.)?
>> 
>>     Take care
>>     Oliver
> 
> -- 
> Phillip Lord,                           Phone: +44 (0) 191 222 7827
> Lecturer in Bioinformatics,             Email: phillip.lord@newcastle.ac.uk
> School of Computing Science,            http://homepages.cs.ncl.ac.uk/phillip.lord
> Room 914 Claremont Tower,               skype: russet_apples
> Newcastle University,                   twitter: phillord
> NE1 7RU                                 
> 


Received on Monday, 22 July 2013 17:23:14 UTC

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