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Bioontology.org and Linked Data?

From: Kingsley Idehen <kidehen@openlinksw.com>
Date: Mon, 22 Jul 2013 12:09:43 -0400
Message-ID: <51ED5947.3090300@openlinksw.com>
To: HCLS <public-semweb-lifesci@w3.org>
All,

I continue to struggle with the notion that Bioontology.org is a point 
of presence on the Web for Linked Data. The URIs associated with this 
data space don't adhere to Linked Data principles as far as I can tell.

Examples:

Vapour Analysis:

Link: 
http://linkeddata.uriburner.com:8000/vapour?uri=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FSNOMEDCT&defaultResponse=dontmind&userAgent=vapour.sourceforge.net


CURL dump:

curl -IL http://purl.bioontology.org/ontology/SNOMEDCT
HTTP/1.1 302 Moved Temporarily
Date: Mon, 22 Jul 2013 16:07:41 GMT
Server: 1060 NetKernel v3.3 - Powered by Jetty
Location: http://bioportal.bioontology.org/virtual/1353
Content-Type: text/html; charset=iso-8859-1
X-Purl: 2.0; http://localhost:8080
Expires: Thu, 01 Jan 1970 00:00:00 GMT
Content-Length: 278
Connection: close

HTTP/1.1 302
Date: Mon, 22 Jul 2013 16:07:42 GMT
Server: Apache/2.2.15 (Red Hat)
X-Powered-By: Phusion Passenger (mod_rails/mod_rack) 3.0.18
Cache-Control: no-cache
X-Runtime: 16
Set-Cookie: _bp_session=99d9609355614f6a360069e5f39c239c; 
domain=.bioontology.org; path=/; HttpOnly
Location: http://bioportal.bioontology.org/visualize/46896
Content-Length: 114
Status: 302
Vary: Accept-Encoding
Connection: close
Content-Type: text/html; charset=utf-8

HTTP/1.1 301
Date: Mon, 22 Jul 2013 16:07:43 GMT
Server: Apache/2.2.15 (Red Hat)
X-Powered-By: Phusion Passenger (mod_rails/mod_rack) 3.0.18
Cache-Control: no-cache
X-Runtime: 38
Set-Cookie: _bp_session=8822d00fdb21e317cc987fcab42aa36b; 
domain=.bioontology.org; path=/; HttpOnly
Location: http://bioportal.bioontology.org/ontologies/46896?p=terms
Content-Length: 123
Status: 301
Vary: Accept-Encoding
Connection: close
Content-Type: text/html; charset=utf-8

HTTP/1.1 200
Date: Mon, 22 Jul 2013 16:07:43 GMT
Server: Apache/2.2.15 (Red Hat)
X-Powered-By: Phusion Passenger (mod_rails/mod_rack) 3.0.18
X-Runtime: 242
ETag: "0f524114ff5c5e8750df09fd898272aa"
Cache-Control: private, max-age=0, must-revalidate
Set-Cookie: _bp_session=b6f2b348269c8540cb63d4cc3721c854; 
domain=.bioontology.org; path=/; HttpOnly
Content-Length: 87778
Status: 200
Vary: Accept-Encoding
Connection: close
Content-Type: text/html; charset=utf-8

Macintosh-96:downloads kidehen$ curl -ILH "Accept: text/turtle" 
http://purl.bioontology.org/ontology/SNOMEDCT
HTTP/1.1 302 Moved Temporarily
Date: Mon, 22 Jul 2013 16:08:14 GMT
Server: 1060 NetKernel v3.3 - Powered by Jetty
Location: http://bioportal.bioontology.org/virtual/1353
Content-Type: text/html; charset=iso-8859-1
X-Purl: 2.0; http://localhost:8080
Expires: Thu, 01 Jan 1970 00:00:00 GMT
Content-Length: 278
Connection: close

HTTP/1.1 302
Date: Mon, 22 Jul 2013 16:08:14 GMT
Server: Apache/2.2.15 (Red Hat)
X-Powered-By: Phusion Passenger (mod_rails/mod_rack) 3.0.18
Cache-Control: no-cache
X-Runtime: 44
Set-Cookie: _bp_session=0c4cf299a4588d56d4f2500a0a655d13; 
domain=.bioontology.org; path=/; HttpOnly
Location: http://bioportal.bioontology.org/visualize/46896
Content-Length: 114
Status: 302
Vary: Accept-Encoding
Connection: close
Content-Type: text/html; charset=utf-8

HTTP/1.1 301
Date: Mon, 22 Jul 2013 16:08:15 GMT
Server: Apache/2.2.15 (Red Hat)
X-Powered-By: Phusion Passenger (mod_rails/mod_rack) 3.0.18
Cache-Control: no-cache
X-Runtime: 13
Set-Cookie: _bp_session=77c17bae2f459c01a3f03a849b820a7f; 
domain=.bioontology.org; path=/; HttpOnly
Location: http://bioportal.bioontology.org/ontologies/46896?p=terms
Content-Length: 123
Status: 301
Vary: Accept-Encoding
Connection: close
Content-Type: text/html; charset=utf-8

HTTP/1.1 200
Date: Mon, 22 Jul 2013 16:08:15 GMT
Server: Apache/2.2.15 (Red Hat)
X-Powered-By: Phusion Passenger (mod_rails/mod_rack) 3.0.18
X-Runtime: 190
ETag: "e851734fe4a58319c13adfde5a28d825"
Cache-Control: private, max-age=0, must-revalidate
Set-Cookie: _bp_session=7607b39fe6788d1a2ad1401e8fe85d43; 
domain=.bioontology.org; path=/; HttpOnly
Content-Length: 87778
Status: 200
Vary: Accept-Encoding
Connection: close
Content-Type: text/html; charset=utf-8

Macintosh-96:downloads kidehen$ curl -ILH "Accept: application/rdf+xml" 
http://purl.bioontology.org/ontology/SNOMEDCT
HTTP/1.1 302 Moved Temporarily
Date: Mon, 22 Jul 2013 16:08:32 GMT
Server: 1060 NetKernel v3.3 - Powered by Jetty
Location: http://bioportal.bioontology.org/virtual/1353
Content-Type: text/html; charset=iso-8859-1
X-Purl: 2.0; http://localhost:8080
Expires: Thu, 01 Jan 1970 00:00:00 GMT
Content-Length: 278
Connection: close

HTTP/1.1 302
Date: Mon, 22 Jul 2013 16:08:32 GMT
Server: Apache/2.2.15 (Red Hat)
X-Powered-By: Phusion Passenger (mod_rails/mod_rack) 3.0.18
Cache-Control: no-cache
X-Runtime: 12
Set-Cookie: _bp_session=f40903a37df9f53d14b22c866ebc56d0; 
domain=.bioontology.org; path=/; HttpOnly
Location: http://bioportal.bioontology.org/visualize/46896
Content-Length: 114
Status: 302
Vary: Accept-Encoding
Connection: close
Content-Type: text/html; charset=utf-8

HTTP/1.1 301
Date: Mon, 22 Jul 2013 16:08:34 GMT
Server: Apache/2.2.15 (Red Hat)
X-Powered-By: Phusion Passenger (mod_rails/mod_rack) 3.0.18
Cache-Control: no-cache
X-Runtime: 10
Set-Cookie: _bp_session=36b560642ed8da07ab12f1eab2bfb0b1; 
domain=.bioontology.org; path=/; HttpOnly
Location: http://bioportal.bioontology.org/ontologies/46896?p=terms
Content-Length: 123
Status: 301
Vary: Accept-Encoding
Connection: close
Content-Type: text/html; charset=utf-8

HTTP/1.1 500
Date: Mon, 22 Jul 2013 16:08:34 GMT
Server: Apache/2.2.15 (Red Hat)
X-Powered-By: Phusion Passenger (mod_rails/mod_rack) 3.0.18
Cache-Control: no-cache
Set-Cookie: _bp_session=f7fa9dcb15b8a9e6c3da2e48f76c0e53; 
domain=.bioontology.org; path=/; HttpOnly
Status: 500
Vary: Accept-Encoding
Connection: close
Content-Type: text/html; charset=utf-8

-- 

Regards,

Kingsley Idehen	
Founder & CEO
OpenLink Software
Company Web: http://www.openlinksw.com
Personal Weblog: http://www.openlinksw.com/blog/~kidehen
Twitter/Identi.ca handle: @kidehen
Google+ Profile: https://plus.google.com/112399767740508618350/about
LinkedIn Profile: http://www.linkedin.com/in/kidehen






Received on Monday, 22 July 2013 16:10:06 UTC

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