- From: Frank Gibbons <francis_gibbons@hms.harvard.edu>
- Date: Wed, 07 Dec 2005 12:31:32 -0500
- To: public-semweb-lifesci@w3.org
Hi, It's great to see such a large group showing interest in this topic. I'm Frank Gibbons, my current position is as Computational Biologist at Harvard Medical School. My interest in SWLS is fairly nuts-n-bolts: I do a lot of "omics", and I see the semantic web as a potential mechanism to allow me to spend more time contemplating interesting scientific hypotheses, by sparing the time and effort I currently must expend on munging & integrating the various datasets that interest me. My background: PhD in physics, couple of years in commercial engineering software development, five years in bioinformatics. I have published several algorithms for discovery/analysis/evaluation of gene-expression clustering, protein-complexes, machine-learning of mass-spec data for protein identification, protein-protein interaction networks, and identification of transcription-factor binding sites. I'm a member of the BioPAX working group, though not very active right now. I'm also a developer on the BioMOBY web-services-for-bioinformatics project. I have been somewhat disappointed with the lack of scalability in many of the semantic/knowledge-management tools and technologies I've tried over the past year or two. My (admittedly limited) experience has been that, at least for the omic-scale data that interests me, the semantic talk is well ahead of the semantic walk. The promise of SWLS remains enticing however, and I can't think of a better place to learn more about current efforts than this group. -Frank Gibbons PhD, Computational Biologist, Harvard Medical School BCMP/SGM-322, 250 Longwood Ave, Boston MA 02115, USA. Tel: 617-432-3555 Fax: 617-432-3557 http://llama.med.harvard.edu/~fgibbons
Received on Thursday, 8 December 2005 04:08:01 UTC