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Re: BioRDF Telcon / HCLS KB

From: Kei Cheung <kei.cheung@yale.edu>
Date: Tue, 18 Nov 2008 10:42:27 -0500
To: Matthias Samwald <samwald@gmx.at>
Cc: HCLS <public-semweb-lifesci@w3.org>, Ronan Fox <ronan.fox@deri.org>, Alan Ruttenberg <alanruttenberg@gmail.com>, Jonathan Rees <jar@creativecommons.org>
Message-id: <4922E263.7050306@yale.edu>

Hi Matthias,

Thanks very much for providing the update. We will discuss the issues you identified at future BioRDF/HCLS calls.

Cheers,

-Kei

Matthias Samwald wrote:
> Dear all,
>
> I am not sure if I can make the BioRDF call today, so I give a short 
> update via e-mail:
>
> I have updated the HCLS KB Virtuoso triplestore at DERI to the 5.0.8 
> version of Virtuoso, which comes with some performance improvements. I 
> also updated the content of the knowledge base to the newest version 
> of the Neurocommons Knowledge Base (which is an updated version of the 
> 'Banff demo' data that the HCLS KB consisted of so far). The current 
> address of the triplestore is
> http://hcls.deri.ie:8080/sparql
> but I will probably change the port to 80 later on.
>
> I am also working on creating a nicer portal / user interface for the 
> KB, based on Drupal and potentially the Science Collaboration 
> Framework (http://sciencecollaboration.org/).
>
> We should probably start thinking about additional datasets that we 
> want to integrate into our KB, and about defining processes and 
> policies for its extensions and maintenance. Furthermore, we should 
> find strategies to align our efforts with projects such as BioGateway 
> (http://www.semantic-systems-biology.org/biogateway) and 
> LinkedLifeData (http://www.linkedlifedata.com/).
>
> Cheers,
> Matthias Samwald
>
> DERI Galway, Ireland
> http://deri.ie/
>
> Konrad Lorenz Institute for Evolution & Cognition Research, Austria
> http://kli.ac.at/
>
>
>
>
>
> --------------------------------------------------
> From: "Kei Cheung" <kei.cheung@yale.edu>
> Sent: Friday, November 14, 2008 9:16 PM
> To: "HCLS" <public-semweb-lifesci@w3.org>
> Subject: BioRDF Telcon
>
>>
>> This is a reminder that the BioRDF call will be held at 11 am (EDT) 
>> on Monday, November 17 (see details below).
>>
>> Cheers,
>>
>> -Kei
>>
>> == BioRDF Telcon Details ==
>>
>>  * Date of Call: Monday November 17, 2008
>>  * Time of Call: 11:00am Eastern Time
>>  * Dial-In #: +1.617.761.6200 (Cambridge, MA)
>>  * Dial-In #: +33.4.89.06.34.99 (Nice, France)
>>  * Dial-In #: +44.117.370.6152 (Bristol, UK)
>>  * Participant Access Code: 246733 ("BIORDF")
>>  * IRC Channel: irc.w3.org port 6665 channel #BioRDF (see W3C IRC 
>> page for details, or see Web IRC)
>>  * Duration: ~1 hour
>>  * Frequency: bi-weekly
>>  * Convener: Kei Cheung
>>
>> == Agenda ==
>>
>> * Roll call and introduction (Kei Cheung)
>> * Gene Wiki (Andrew Su)
>> * Web visualization (Maged Kamel Boulos)
>> * Q & A (All)
>>
>
Received on Tuesday, 18 November 2008 15:43:29 UTC

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