Re: cell types, brain regions mentioned in gensat

Alan,

Didn't you and I review this already at the ABA site.

All one would need to do is bring up one of these images at the ABA  
site, go through the "noodling" we did, and look at the corresponding  
entries in the spreadsheet to match up a "meaning" to each column  
(probably nearly all those columns).

Cheers,
Bill

On Mar 2, 2007, at 2:15 PM, Nigam Shah wrote:

>> BTW, if someone has a theory of what the other number in
>> ontology.xls are, I'm all ears.
>
> Okay, pure guesses:
>
> Line 4 = Cerebral
> cortex,CTX,CH,176,255,184,3,85,4141526,61.647,29.999,33.711
>
> 176,255,184 seem like RGB values (they all range from 2 to 255) for
> that region in the image.
> 3 is a serial number or internal id.
> 85 - no clue
> 4141526 - no clue
> 61.647,29.999,33.711 seem like 3D voxel coordinates.
>
> --Nigam.
>

Bill Bug
Senior Research Analyst/Ontological Engineer

Laboratory for Bioimaging  & Anatomical Informatics
www.neuroterrain.org
Department of Neurobiology & Anatomy
Drexel University College of Medicine
2900 Queen Lane
Philadelphia, PA    19129
215 991 8430 (ph)
610 457 0443 (mobile)
215 843 9367 (fax)


Please Note: I now have a new email - William.Bug@DrexelMed.edu

Received on Friday, 2 March 2007 22:10:44 UTC