RE: scientific publishing task force update

Hi Kei,

Once an OWL ontology is published there are no typos!  If one wants to
use the ontology, one must conform to the definitions.

cheers,
Michael

> -----Original Message-----
> From: kei cheung [mailto:kei.cheung@yale.edu] 
> Sent: Monday, June 12, 2006 9:33 AM
> To: Miller, Michael D (Rosetta)
> Cc: public-semweb-lifesci@w3.org
> Subject: Re: scientific publishing task force update
> 
> 
> "Eperimental" looks to me like a typo, it should be "Experimental"?
> 
> Cheers,
> 
> -Kei
> 
> Miller, Michael D (Rosetta) wrote:
> 
> >Hi All,
> >
> >  
> >
> >>It might be interesting to compare this with FUGE.
> >>    
> >>
> >
> >Yes, there's definite overlap.
> >
> >Also wanted to pass along one of the top-level classes:
> >
> >"<owl:Class
> >rdf:about="http://www.hozo.jp/owl/EXPOApr19.xml/EperimentalDe
> signTask">"
> >
> >I'm not exactly sure what "Eperimental" means!
> >
> >cheers,
> >Michael
> >
> >  
> >
> >>-----Original Message-----
> >>From: public-semweb-lifesci-request@w3.org 
> >>[mailto:public-semweb-lifesci-request@w3.org] On Behalf Of 
> kei cheung
> >>Sent: Monday, June 12, 2006 8:07 AM
> >>To: William Bug
> >>Cc: Mark Musen; public-semweb-lifesci@w3.org
> >>Subject: Re: scientific publishing task force update
> >>
> >>
> >>
> >>Hi Bill and Mark et al.,
> >>
> >>I also went the EXPO site 
> (http://sourceforge.net/projects/expo/) and 
> >>found the EXPO ontology in OWL format (I agree that it's 
> >>quite hidden). 
> >>I have unzipped it and make it available at:
> >>
> >>http://twiki.med.yale.edu/kei_web/sw_group/EXPO04-19-06.owl
> >>
> >>It might be interesting to compare this with FUGE.
> >>
> >>Cheers,
> >>
> >>-Kei
> >>
> >>William Bug wrote:
> >>
> >>    
> >>
> >>>This was a new one on me too, Mark.  It was posted to 
> Slashdot the  
> >>>other day, and the Sorceforge site the article points to is  
> >>>essentially empty.
> >>>
> >>>http://sourceforge.net/projects/expo/
> >>>
> >>>As you might gather, EXPO is not a very good term to 
> search in all  
> >>>the usual suspect search engines - INSPEC, PubMed, IEEE XPlore,  
> >>>CiteSeer.IST, and Google/Google Scholar.  Only a very few 
> specific  
> >>>studies using EXPO in the title came up in:
> >>>
> >>>PubMed:
> >>>
> >>>CT-expo--a novel program for dose evaluation in CT
> >>>Rofo. 2002 Dec;174(12):1570-6.
> >>>
> >>>
> >>>
> >>> INSPEC:
> >>>
> >>>The extended Poincare generating function type (EXPO)
> >>>
> >>>Extrasolar Planet Observatory (ExPO)
> >>>
> >>>EXPO is the integration of two programs, EXTRA and 
> >>>      
> >>>
> >>SIRPOW.92 and is a  
> >>    
> >>
> >>>program for full powder decomposition and crystal structure 
> >>>      
> >>>
> >>solution.
> >>    
> >>
> >>>
> >>>ACL Anthology of research papers in Comp. Linguistics
> >>>
> >>>A FORMAL GRAMMAR OF EXPRESSIVENESS FOR SACRED LEGENDS
> >>>acl.ldc.upenn.edu/C/C80/C80-1023.pdf
> >>>
> >>>(an absolutely fascinating manuscript in no way related to this  
> >>>research project)
> >>>
> >>>
> >>>There is certainly much interesting and relevant research 
> >>>      
> >>>
> >>going on in  
> >>    
> >>
> >>>this center at the University of Aberystwyth 
> >>>      
> >>>
> >>(http://www.aber.ac.uk/ 
> >>    
> >>
> >>>compsci/Research/bio/grants.shtml), but I wasn't able to find an  
> >>>specific reference to EXPO anywhere, though clearly it 
> >>>      
> >>>
> >>could be the  
> >>    
> >>
> >>>result of research in any one of several of the projects listed.
> >>>
> >>>In the end, I just gave up.
> >>>
> >>>Cheers,
> >>>Bill
> >>>
> >>>
> >>>On Jun 9, 2006, at 1:29 PM, Mark Musen wrote:
> >>>
> >>>      
> >>>
> >>>>On Jun 8, 2006, at 10:09 PM, AJ Chen wrote:
> >>>>
> >>>>        
> >>>>
> >>>>>The first task is to develop an ontology for self-publishing of  
> >>>>>experiment. I have proposed a list of objects and properties  
> >>>>>related to self-publishing experiment. Please download 
> >>>>>          
> >>>>>
> >>the  attached 
> >>    
> >>
> >>>>>file under Task Status and review the proposal. Your  
> >>>>>          
> >>>>>
> >>feedback and 
> >>    
> >>
> >>>>>comments will be greatly appreciated.  You may also  edit 
> >>>>>          
> >>>>>
> >>the file 
> >>    
> >>
> >>>>>directly and email me the edited file.
> >>>>>
> >>>>>          
> >>>>>
> >>>>A colleague just pointed me to this (rather vacuous) 
> >>>>        
> >>>>
> >>article.  Does  
> >>    
> >>
> >>>>anyone know more about this work?
> >>>>
> >>>>http://www.newscientisttech.com/article/dn9288-translator-lets- 
> >>>>computers-understand-experiments-.html
> >>>>
> >>>>Mark
> >>>>
> >>>>        
> >>>>
> >>>Bill Bug
> >>>Senior Analyst/Ontological Engineer
> >>>
> >>>Laboratory for Bioimaging  & Anatomical Informatics
> >>>www.neuroterrain.org
> >>>Department of Neurobiology & Anatomy
> >>>Drexel University College of Medicine
> >>>2900 Queen Lane
> >>>Philadelphia, PA    19129
> >>>215 991 8430 (ph)
> >>>610 457 0443 (mobile)
> >>>215 843 9367 (fax)
> >>>
> >>>
> >>>Please Note: I now have a new email - William.Bug@DrexelMed.edu
> >>>
> >>>
> >>>
> >>>
> >>>
> >>>
> >>>
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> >>>      
> >>>
> >>individual to whom 
> >>    
> >>
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> >>>      
> >>>
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> >>    
> >>
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> >>>      
> >>>
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> >>    
> >>
> >>>are not the intended recipient please notify us immediately by 
> >>>returning this message to the sender and delete all copies. 
> >>>      
> >>>
> >>Thank you 
> >>    
> >>
> >>>for your cooperation.
> >>>
> >>>      
> >>>
> >>
> >>
> >>
> >>    
> >>
> >
> >
> >  
> >
> 
> 
> 
>

Received on Monday, 12 June 2006 16:37:05 UTC