- From: jerven Bolleman <jerven.bolleman@sib.swiss>
- Date: Tue, 6 Apr 2021 14:11:47 +0200
- To: public-bioschemas@w3.org
Hi Petr, Vittorio, Would you mind sharing some markup/json-ld so that we have a concrete example to work with. For me at least a concrete example helps a lot. Regards, Jerven On 06/04/2021 14:07, Petr Holub wrote: > Dear all, > > could you please review Vittorio's proposal below? We are implementing > the BioSchemas into production in the BBMRI-ERIC Directory and the > initial mapping we have done almost 3 years back are no longer usable - > and thus Vittorio has created the proposal below and we would like to > confirm it before continuing. > > Thanks, > Petr > > > > **Assoc. Prof. *RNDr. Petr Holub, Ph.D. > *Senior IT/Data Protection Manager* > > BBMRI-ERIC* | Neue Stiftingtalstrasse 2/B/6 | 8010 Graz | AUSTRIA > Phone: +43 316 34 99 17-18 | Fax: +43 316 34 99 17-99 | Mobile: +43 664 > 88 72 18 77 > Skype:holubp | petr.holub@bbmri-eric.eu > <mailto:petr.holub@bbmri-eric.eu> | www.bbmri-eric.eu > <http://www.bbmri-eric.eu><https://mail.acpcloud.de/owa/redir.aspx?C=tQtD-G9C_kuPP8hViFQ4hgNjuhtf_dEI0JIE-vC5gXhf36JcThZMI5N8J9ocveR1mgFita1orqo.&URL=http%3a%2f%2fwww.bbmri-eric.eu%2f> > > ------------------------------------------------------------------------ > *From:* Vittorio Meloni <vittorio.meloni@crs4.it> > *Sent:* Tuesday, March 30, 2021 14:09 > *To:* public-bioschemas@w3.org <public-bioschemas@w3.org> > *Subject:* Advice for applying Bioschemas to BBMRI Directory > Dear Bioschemas Members, > I am Vittorio Meloni and I'm collaborating with BBMRI to add Bioschemas > into the Biobanks' Directory. In particular, I need to represent > Biobanks and Collections concepts, which are compliant with the MIABIS > 2.0 model: the Biobank is the organization that stores samples and data > related to the samples while a Collection is the set of samples. > According to these definitions, I mapped the Biobank to DataCatalog, > using the "provider" attribute to describe the organization and the > "dataset" attribute for the list of Collections, and the Collection to a > Dataset. Do you think this mapping would be correct? > Another issue I have is how to add additional properties to a > Collection: for example, how can I express that a Collection collects > materials as DNA? With the DataRecord I could use additionalProperty, > but it is Deprecated now. I've found the variableMeasured property but > I'm not sure it fits correctly. Do you think that's the right way to go? > > Any suggestion or comment would be appreciated. > Thank you, > Vittorio > > -- > Vittorio Meloni > Data Intensive Computing - Digital Health Group > CRS4 - Centro di Ricerche, Sviluppo e Studi Superiori della Sardegna > POLARIS, Edificio 1, 09010 PULA (CA - Italy) > > Email: vittorio.meloni@crs4.it > <https://webmail.crs4.it/imp/message.php?index=221#> -- *Jerven Tjalling Bolleman* Principal Software Developer *SIB | Swiss Institute of Bioinformatics* 1, rue Michel Servet - CH 1211 Geneva 4 - Switzerland t +41 22 379 58 85 Jerven.Bolleman@sib.swiss - www.sib.swiss
Received on Tuesday, 6 April 2021 12:12:05 UTC