Re: COVID19 Cross-Domain Linked Dataset

And some public background:

https://www.prnewswire.com/news-releases/exaptive-partners-with-the-bill--melinda-gates-foundation-to-launch-the-covid-19-cognitive-city-301027185.html


On Sun, Mar 29, 2020 at 1:04 PM David McDonell <david@iconicloud.com> wrote:

> Here is a collaborative community underway that might be worth checking
> out (co-sponsored by Exaptive and the Bill & Melinda Gates Foundation):
>
> https://covid-19.cognitive.city/cognitive/welcome
>
>
>
> On Sun, Mar 29, 2020 at 12:54 PM Sören Auer <auer@l3s.de> wrote:
>
>> Dear all,
>>
>> It would be amazing, if we as a community can contribute in some way to
>> fight COVID19.
>>
>> We also started integrating some COVID related research findings into
>> the Open Research Knowledge Graph, aiming at giving researchers a better
>> comparative overview on the state of the art. Here you can see a
>> comparative survey on R0 reproductive number estimates from different
>> studies and some corresponding visualizations:
>>
>> https://www.orkg.org/orkg/comparison/R12251
>>
>> https://vitalis-wiens.github.io/ChartVisTest/
>>
>> Please let us know if you have any ideas or would like to contribute.
>>
>> Best,
>>
>> Sören
>>
>>
>> On 27.03.2020 20:10, Blake Regalia wrote:
>> > Following up on what Krzysztof posted:
>> >
>> > We have put some basic information and examples from our COVID-19
>> > knowledge graph up on the website here:
>> > https://covid.geog.ucsb.edu/
>> >
>> > Thanks
>> >  - Blake Regalia
>> >
>> >
>> > On Fri, Mar 27, 2020 at 10:45 AM Oscar Corcho <ocorcho@fi.upm.es
>> > <mailto:ocorcho@fi.upm.es>> wrote:
>> >
>> >     Thanks Kryzstof,
>> >
>> >     If anyone needs also a SOLR index of all the papers from the
>> >     CORD-19/Kaggle dataset to build things on top of and prefers not to
>> >     setup its own one, we have made this one available in one of our
>> >     servers. If you are planning to make use of it, let us know, so that
>> >     we can be alert in case that the service goes down (the amount of
>> >     cyberattacks to our servers in Madrid has been growing constantly
>> >      during this last week, which goes on top of the set of humanitarian
>> >     and health problems that we have here in Spain).
>> >
>> >     https://librairy.linkeddata.es/data/covid/select?q=*:*
>> >
>> >     This index contains not only the raw data available in
>> >     CORD-19/Kaggle, but also the results of annotating the papers with
>> >     ATC codes (drugs and their combinations that have been reported in
>> >     the papers) and diagnoses and tests that have been obtained with
>> >     CliNER. We will be adding more types of annotations.
>> >
>> >     We have also generated a probabilistic topic model with this corpus
>> >     based on the ATC codes, in case that anyone wants to exploit it as
>> >     well: http://librairy.linkeddata.es/covid19-model/
>> >
>> >     We will also be providing RDF versions of some of this data that can
>> >     be joined with the data made available by the Ghent folks and by
>> >     you, if you wish.
>> >
>> >     Oscar and the rest of the team (Carlos Badenes, Pablo Calleja,
>> >     Mariano Rico)
>> >
>> >     --
>> >     Oscar Corcho
>> >     Ontology Engineering Group
>> >     Departamento de Inteligencia Artificial
>> >     ETSI Informáticos
>> >     Universidad Politécnica de Madrid
>> >     Campus de Montegancedo, sn
>> >     28660 Boadilla del Monte, Madrid
>> >     Tel: +34 910672911
>> >
>> >
>> >
>> >
>> >>     El 27 mar 2020, a las 18:19, Krzysztof Janowicz <janowicz@ucsb.edu
>> >>     <mailto:janowicz@ucsb.edu>> escribió:
>> >>
>> >>     Dear all,
>> >>
>> >>     This is an update on our open knowledge graph about COVID-19.
>> >>
>> >>     In our knowledge graph, we have:
>> >>       (1). COVID19 cases for countries and regions (data from Johns
>> >>     Hopkins University)
>> >>       (2). Airlines that are suspended due to COVID19 (data are
>> >>     partially donated from Aviation Edge and partially from manual
>> >>     collection)
>> >>       (3). Quarantine policies across the world (manually collected)
>> >>       (4). Relief aids from NGO (manually collected)
>> >>       (5). Regions on multiple levels
>> >>       (6). Local event data such as cancellations (so far by example
>> only)
>> >>       (7). Supply chain disruptions (so far by example only)
>> >>
>> >>     We are  updating our KG by adding more resources. Examples include:
>> >>      (1). Supply chains from wikidata
>> >>      (2). Virus strain data (we are collaborating with UCSD on this
>> >>     part right now)
>> >>      (3). Research articles from Kaggle (Thanks to Pieter, we will
>> >>     integrate your KG to ours)
>> >>
>> >>     This KG can be visualized at:
>> >>
>> http://covid.geog.ucsb.edu:7200/graphs-visualizations?config=48691118befc47e4a6a6aabde78cd73d
>> >>
>> >>     Example query:
>> >>
>> http://covid.geog.ucsb.edu:7200/sparql?savedQueryName=Max%20Confirmed%20Cases&owner=admin&execute
>> >>
>> >>     Query endpoint: http://covid.geog.ucsb.edu:7200/sparql and
>> >>     http://covid.geog.ucsb.edu:7200/repositories/COVID-19
>> >>
>> >>     Raw RDF: use the export at http://covid.geog.ucsb.edu:7200/graphs
>> >>
>> >>     Please keep in mind that we are constantly changing the data and
>> >>     even the underlying ontology; things will break at times.
>> >>
>> >>     We hope this can be another initiative for our community to
>> >>     contribute to such a global challenge. Any suggestions and/or
>> >>     interests of collaborations are *most* welcome.
>> >>
>> >>     Krzysztof
>> >>
>> >>     --
>> >>     Krzysztof Janowicz
>> >>
>> >>     Geography Department, University of California, Santa Barbara
>> >>     4830 Ellison Hall, Santa Barbara, CA 93106-4060
>> >>
>> >>     Email: jano@geog.ucsb.edu <mailto:jano@geog.ucsb.edu>
>> >>     Webpage: http://geog.ucsb.edu/~jano/
>> >>     Semantic Web Journal: http://www.semantic-web-journal.net
>> >>
>> >>
>> >
>>
>>
>> --
> David McDonell Co-founder & CEO ICONICLOUD, Inc. "Illuminating the cloud"
> M: 703-864-1203 EM: david@iconicloud.com URL: http://iconicloud.com
>
-- 
David McDonell Co-founder & CEO ICONICLOUD, Inc. "Illuminating the cloud"
M: 703-864-1203 EM: david@iconicloud.com URL: http://iconicloud.com

Received on Sunday, 29 March 2020 17:08:54 UTC