- From: Peter Murray-Rust <pm286@cam.ac.uk>
- Date: Mon, 9 May 2011 10:38:04 +0100
- To: William Waites <ww@styx.org>
- Cc: "Ben O'Steen" <bosteen@gmail.com>, public-xg-lld <public-xg-lld@w3.org>, david.shotton@zoo.ox.ac.uk, mark@odaesa.com
- Message-ID: <BANLkTikbfOH2uF=xbRs2-M7QESgNmDPqzg@mail.gmail.com>
On Mon, May 9, 2011 at 9:43 AM, William Waites <ww@styx.org> wrote: > * [2011-05-08 23:12:25 +0100] Peter Murray-Rust <pm286@cam.ac.uk> écrit: > > ] There are not normally any supplemental data sets (where the data and > ] chemicals live) in the Medline distro so chemicals and data don't arise > ] (except in fulltext, i.e. only Open Access allowed). > > Right, so in medline we see things like this: > > <DataBankList CompleteYN="Y"> > <DataBank> > <DataBankName>ISRCTN</DataBankName> > <AccessionNumberList> > <AccessionNumber>ISRCTN17632637</AccessionNumber> > </AccessionNumberList> > </DataBank> > </DataBankList> > > <ChemicalList> > <Chemical> > <RegistryNumber>0</RegistryNumber> > <NameOfSubstance>Antipsychotic Agents</NameOfSubstance> > </Chemical> > <Chemical> > <RegistryNumber>0</RegistryNumber> > <NameOfSubstance>Blood Glucose</NameOfSubstance> > </Chemical> > </ChemicalList> > > This is fairly lowgrade metadata as far as chemistry is concerned. I imagine it's a list of MeSH terms which are tagged as "chemical" in some way. I assume it's been put in by MeSH or similar. It's no great loss if we don't use it IMO so I'd omit it till we find more info > I'm not entirely sure how these relate to the articles in question, is > the data bank source material or a result of the research, are the > chemical references more like keywords, etc? > > It may be that we are not allowed to release this part of the data, but > perhaps one day we will, and the relevance to the LLD IG is how this > information should be treated if it were releasable, which is not at all > clear to me. > > Cheers, > -w > > -- > William Waites <mailto:ww@styx.org> > http://river.styx.org/ww/ <sip:ww@styx.org> > F4B3 39BF E775 CF42 0BAB 3DF0 BE40 A6DF B06F FD45 > -- Peter Murray-Rust Reader in Molecular Informatics Unilever Centre, Dep. Of Chemistry University of Cambridge CB2 1EW, UK +44-1223-763069
Received on Monday, 9 May 2011 09:38:32 UTC