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RE: Ontology for Somatic Mutations?

From: Lin MD, Simon <LINMD.SIMON@mcrf.mfldclin.edu>
Date: Thu, 18 Jul 2013 20:38:31 +0000
To: Oliver Ruebenacker <curoli@gmail.com>, public-semweb-lifesci <public-semweb-lifesci@w3.org>
Message-ID: <A5BD550FC766564987DA2A5977989030507B5DBB@MCL-EXMB04.mfldclin.org>
There is a sequence ontology used by ClinVar (NCBI) and others.

http://www.sequenceontology.org/

We are planning to use it in our clinical genomics applications.

Simon


==================================================
Simon Lin, MD | Director, Biomedical Informatics Research Center | Marshfield Clinic Research Foundation | 1000 N Oak Ave, Marshfield, WI 54449 | 715-221-7299 | Lin.Simon@mcrf.mfldclin.edu<mailto:Lin.Simon@mcrf.mfldclin.edu> | www.marshfieldclinic.org/birc<http://www.marshfieldclinic.org/birc>


From: Oliver Ruebenacker [mailto:curoli@gmail.com]
Sent: Thursday, July 18, 2013 3:00 PM
To: public-semweb-lifesci
Subject: Ontology for Somatic Mutations?


     Hello,

  Does any one know of an ontology for somatic mutations (including SNPs, chromosomal abnormalities, etc.)?

     Take care
     Oliver

--
Head of Systems Biology Task Force at PanGenX (http://www.pangenx.com)
Any sufficiently advanced technology is indistinguishable from magic.

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Received on Thursday, 18 July 2013 20:39:02 UTC

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