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Re: Clinical Trials Datasets in UK

From: Kingsley Idehen <kidehen@openlinksw.com>
Date: Fri, 20 Dec 2013 12:57:54 -0500
Message-ID: <52B48522.4030505@openlinksw.com>
To: public-semweb-lifesci@w3.org
On 12/18/13 11:53 AM, Jiang, Guoqian, M.D., Ph.D. wrote:
> Hi, Oktie,
>
> Thanks much for your note. The LinkedCT is a very nice RDF dataset for 
> ClinicalTrials.gov and we have explored it a little bit, which as you 
> pointed out contains a subset of UK clinical trials. We were wondering 
> whether there is a comprehensive dataset available for the UK trials.
>
> BTW, do you have a schema available for the LinkedCT dataset?
>
> Thanks,
>
> -Guoqian

Collection of links showcasing this data from our LOD Cloud cache:

Faceted Browsing:

[1] http://bit.ly/1i77YlD -- Count of Trials by Responsible Party
[2] http://bit.ly/1bVsPQf -- Count of Trials by Study Type
[3] http://bit.ly/1bVs89K -- ditto by Month/Year
[4] http://bit.ly/1bVredd -- ditto by Country.

SPARQL Query Results Pages (clicking on solution URIs takes you to the 
original dataset's data space):

[1] http://bit.ly/1i73xqR -- 50 Entity Types from the Clinical Trials 
Dataset (scoped to its own Named Graph)
[2] http://bit.ly/1bVqkxn -- 50 Conditions form the Clinical Trials Dataset.


Kingsley

>
>
> From: Oktie Hassanzadeh <oktie@cs.toronto.edu 
> <mailto:oktie@cs.toronto.edu>>
> Date: Tuesday, December 17, 2013 4:04 PM
> To: "Jiang, Guoqian, M.D., Ph.D." <jiang.guoqian@mayo.edu 
> <mailto:jiang.guoqian@mayo.edu>>
> Cc: "public-semweb-lifesci@w3.org 
> <mailto:public-semweb-lifesci@w3.org>" <public-semweb-lifesci@w3.org 
> <mailto:public-semweb-lifesci@w3.org>>
> Subject: Re: Clinical Trails Datasets in UK
>
> Hi Guoqian,
>
> At least a subset (or perhaps the majority) of the trials performed in 
> the U.K. are registered on ClinicalTrials.gov as well and as a result 
> can be found on LinkedCT http://linkedct.org which provides RDF. You 
> can download an RDF dump of the data at: 
> http://www.cs.toronto.edu/~oktie/linkedct 
> <http://www.cs.toronto.edu/%7Eoktie/linkedct>
>
> I searched for the ID of a few trials found through the search 
> services you have listed in your email and was able to find them on 
> LinkedCT.
>
> Cheers,
> Oktie
>
> ========================
> Oktie Hassanzadeh
> oktie@cs.toronto.edu <mailto:oktie@cs.toronto.edu>
> http://www.cs.toronto.edu/~oktie <http://www.cs.toronto.edu/%7Eoktie>
>
>
> On Tue, Dec 17, 2013 at 4:36 PM, Jiang, Guoqian, M.D., Ph.D. 
> <Jiang.Guoqian@mayo.edu <mailto:Jiang.Guoqian@mayo.edu>> wrote:
>
>
>     A colleague of mine is interested in looking at the clinical
>     trials in UK. I understand that there are a number of data search
>     portal available.
>
>     http://www.nhs.uk/Conditions/Clinical-trials/Pages/clinical-trial.aspx
>
>     https://www.clinicaltrialsregister.eu/ctr-search/search
>
>     http://apps.who.int/trialsearch/Default.aspx
>
>     Do you happen to know whether this kind of clinical trial datasets
>     are publicly available for download, ideally in RDF?
>
>     Best regards,
>
>     -Guoqian
>
>


-- 

Regards,

Kingsley Idehen	
Founder & CEO
OpenLink Software
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Received on Friday, 20 December 2013 17:58:17 UTC

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