Re: Vocabulary

Hi Talapady,
 In a round about kind of way, I was asking why the gene id entries are
*not* linked to their sources e.g. Which source tells us the gene id for
DictyBase

m.


On Mon, Apr 8, 2013 at 11:21 AM, Bhat, Talapady N.
<talapady.bhat@nist.gov>wrote:

> Hi,****
>
> ** **
>
> This is what I did.****
>
> ** **
>
> In the Web page  http://xpdb.nist.gov/bioroot/bioroot.pl****
>
> I typed ‘Gene’ and waited for it to auto fill ‘Gene ID’ or to show all
> other terms that start with ‘Gene’****
>
> ** **
>
> Then I pressed enter.****
>
> It gave a list of highly re-used terms with ‘Gene ID’****
>
> If you click on the term ‘Gene ID’ you get the hyper link that you
> mentioned.****
>
> ** **
>
> You could also have queried the site for strings other than ‘Gene ID’****
>
> I hope it helps****
>
> ** **
>
> I Know that our help files need be improved.****
>
> ** **
>
> T N Bhat****
>
> ** **
>
> *From:* Michel Dumontier [mailto:michel.dumontier@gmail.com]
> *Sent:* Monday, April 08, 2013 11:07 AM
> *To:* Bhat, Talapady N.
> *Cc:* Amrapali J Zaveri; w3.hcls@gmail.com; W3C HCLSIG hcls
> *Subject:* Re: Vocabulary****
>
> ** **
>
> Hi Talapady,****
>
>  Very interesting resource! ****
>
> ** **
>
>  Can you quickly explain how you generate ****
>
>
> http://xpdb.nist.gov/bioroot/bioroot.pl?allTrees=1&termid=1180437&wrd=Gene%20ID&foundin=::50::
> ****
>
> ** **
>
> from the sources you list here:****
>
> ** **
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> http://xpdb.nist.gov/bioroot/help_docs/source.htm****
>
> ** **
>
> ** **
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> Thanks!****
>
> ** **
>
> m.****
>
> ** **
>
> On Mon, Apr 8, 2013 at 10:26 AM, Bhat, Talapady N. <talapady.bhat@nist.gov>
> wrote:****
>
> Hi,****
>
> Have a look at http://xpdb.nist.gov/bioroot/bioroot.pl and type Gene ID.
> Then you get a list of re-used terms. If you click any of member (shown in
> blue) of the list, you get another list showing their use.****
>
> I am not sure whether I have been of much help for you.****
>
>  ****
>
> T N Bhat****
>
>  ****
>
> *From:* Amrapali J Zaveri [mailto:amrapali.j.zaveri@gmail.com]
> *Sent:* Monday, April 08, 2013 10:02 AM
> *To:* w3.hcls@gmail.com; W3C HCLSIG hcls
> *Subject:* Vocabulary****
>
>  ****
>
> Hi,****
>
>  ****
>
> Please could some one point me to a vocabulary that i could (re-)use to
> represent Gene ID's, Gene Symbols, Gene Names etc.****
>
>
> ****
>
> Thanks.****
>
> Regards,
> Amrapali Zaveri****
>
> http://aksw.org/AmrapaliZaveri****
>
>
>
> ****
>
> ** **
>
> -- ****
>
> Michel Dumontier****
>
> Associate Professor of Bioinformatics, Carleton University****
>
> Chair, W3C Semantic Web for Health Care and the Life Sciences Interest
> Group****
>
> http://dumontierlab.com****
>



-- 
Michel Dumontier
Associate Professor of Bioinformatics, Carleton University
Chair, W3C Semantic Web for Health Care and the Life Sciences Interest Group
http://dumontierlab.com