Re: Fwd: [Ops-ttf] Fwd: DrugBank not available?

Yes, I've been working on a parser for SIDER [1]. I just made a pull
request to Bio2RDF (and is waiting code review by Peter). I've made the
preliminary RDF files temporarily available [2], and there is a *temporary*
endpoint to browse [3].

m.

[1]
https://github.com/micheldumontier/bio2rdf-scripts/blob/sider/sider/sider.php
[2] http://bio2rdf.semanticscience.org/temp/sider.tgz
[3] http://bio2rdf.semanticscience.org:12054/fct/


On Tue, Dec 11, 2012 at 6:45 PM, Bonnie MacKellar <mackellb@stjohns.edu>wrote:

> Hi,****
>
> ** **
>
> I am trying to use SIDER for a project, another one of the datasets that
> no longer is accessible. Is it also included in Bio2RDF? Is it available
> elsewhere?****
>
> ** **
>
> Thanks so much,****
>
> Bonnie MacKellar****
>
> St John’s University, New York City****
>
> mackellb@stjohns.edu****
>
> ** **
>
> *From:* Michel Dumontier [mailto:michel.dumontier@gmail.com]
> *Sent:* Tuesday, December 11, 2012 6:40 PM
> *To:* Peter Ansell
> *Cc:* Umutcan ŞİMŞEK; public-semweb-lifesci@w3.org
> *Subject:* Re: Fwd: [Ops-ttf] Fwd: DrugBank not available?****
>
> ** **
>
> As part of Bio2RDF Release 2 [1], the drugbank data and endpoint are
> available, but we're still finalizing some configurations for the Bio2RDF
> web app to respond to requests to the release 2 endpoints. ****
>
> ** **
>
> m.****
>
> ** **
>
> [1] http://s4.semanticscience.org/release_2.html****
>
> On Tue, Dec 11, 2012 at 6:18 PM, Peter Ansell <ansell.peter@gmail.com>
> wrote:****
>
> Michel
> Dumontier could tell you the status of the SPARQL endpoint and the
> downloadable dataset. ****
>
>
>
> ****
>
> ** **
>
> -- ****
>
> Michel Dumontier****
>
> Associate Professor of Bioinformatics, Carleton University****
>
> Chair, W3C Semantic Web for Health Care and the Life Sciences Interest
> Group****
>
> http://dumontierlab.com****
>
> ** **
>



-- 
Michel Dumontier
Associate Professor of Bioinformatics, Carleton University
Chair, W3C Semantic Web for Health Care and the Life Sciences Interest Group
http://dumontierlab.com