- From: Kei Cheung <kei.cheung@yale.edu>
- Date: Tue, 01 Sep 2009 15:04:55 -0400
- To: Maryann Martone <maryann@ncmir.ucsd.edu>
- Cc: Nigam Shah <nigam@stanford.edu>, Helen Parkinson <parkinson@ebi.ac.uk>, HCLS <public-semweb-lifesci@w3.org>, tomasz.adamusiak@gmail.com, Fahim Imam <smtifahim@gmail.com>
Thanks for letting us know, Maryann. -Kei Maryann Martone wrote: > It is already. > > On Sep 1, 2009, at 11:58 AM, Kei Cheung wrote: > >> Nigam Shah wrote: >>> On Tue, Sep 1, 2009 at 6:37 AM, Helen Parkinson <parkinson@ebi.ac.uk >>> <mailto:parkinson@ebi.ac.uk>> wrote: >>> >>> The performance depends largely on how well the ontology is >>> aligned with the input data, for this reason we developed our own >>> ontology. >>> >>> This is very true. However, if there is already an existing ontology >>> that matches the input data well (e.g. the NCI Thesaurus in case of >>> Tissue Microarray Annotations in TMAD (http://tma.stanford.edu/) .. >>> then its possible to use the annotator tool at NCBO >>> (http://bioportal.bioontology.org/annotate). >>> >>> Regards, >>> Nigam. >> I notice that EFO is accessible through BioPortal. As the Neurolex >> group is in the process of updating NIFSTD, perhaps the new version >> of NIFSTD may also be made accessible through BioPortal when it's ready. >> >> Thanks, >> >> -Kei >> > > > > > Maryann Martone > Professor-In-Residence > Dept of Neurosciences > University of California, San Diego > San Diego, CA 92093-0446 > Tel: 858 822 0745 > Fax: 858 246 0644 > > > > >
Received on Tuesday, 1 September 2009 19:05:43 UTC