- From: Maryann Martone <maryann@ncmir.ucsd.edu>
- Date: Tue, 1 Sep 2009 12:02:01 -0700
- To: Kei Cheung <kei.cheung@yale.edu>
- Cc: Nigam Shah <nigam@stanford.edu>, Helen Parkinson <parkinson@ebi.ac.uk>, HCLS <public-semweb-lifesci@w3.org>, tomasz.adamusiak@gmail.com, Fahim Imam <smtifahim@gmail.com>
It is already. On Sep 1, 2009, at 11:58 AM, Kei Cheung wrote: > Nigam Shah wrote: >> On Tue, Sep 1, 2009 at 6:37 AM, Helen Parkinson >> <parkinson@ebi.ac.uk <mailto:parkinson@ebi.ac.uk>> wrote: >> >> The performance depends largely on how well the ontology is >> aligned with the input data, for this reason we developed our own >> ontology. >> >> This is very true. However, if there is already an existing >> ontology that matches the input data well (e.g. the NCI Thesaurus >> in case of Tissue Microarray Annotations in TMAD (http://tma.stanford.edu/ >> ) .. then its possible to use the annotator tool at NCBO (http://bioportal.bioontology.org/annotate >> ). >> >> Regards, >> Nigam. > I notice that EFO is accessible through BioPortal. As the Neurolex > group is in the process of updating NIFSTD, perhaps the new version > of NIFSTD may also be made accessible through BioPortal when it's > ready. > > Thanks, > > -Kei > Maryann Martone Professor-In-Residence Dept of Neurosciences University of California, San Diego San Diego, CA 92093-0446 Tel: 858 822 0745 Fax: 858 246 0644
Received on Tuesday, 1 September 2009 19:02:41 UTC