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Re: blog: semantic dissonance in uniprot

From: Oliver Ruebenacker <curoli@gmail.com>
Date: Thu, 26 Mar 2009 17:04:25 -0400
Message-ID: <5639badd0903261404h1f412409pcb2687f04c140662@mail.gmail.com>
To: Phillip Lord <phillip.lord@newcastle.ac.uk>
Cc: Mark Wilkinson <markw@illuminae.com>, W3C HCLSIG hcls <public-semweb-lifesci@w3.org>
     Hello Philip, All,

On Thu, Mar 26, 2009 at 8:20 AM, Phillip Lord
<phillip.lord@newcastle.ac.uk> wrote:
> Besides which, the issue being discussed here is one of equality. When
> are two proteins the same protein?

  Some people involved in BioPAX think they are the same if and only
if they have the same sequence.

  I think more useful for Systems Biology is that they participate in
the same reactions with the same kinetics.

     Take care

Oliver Ruebenacker, Computational Cell Biologist
BioPAX Integration at Virtual Cell (http://vcell.org/biopax)
Center for Cell Analysis and Modeling
Received on Thursday, 26 March 2009 21:05:04 UTC

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