- From: Erick Antezana <erant@psb.vib-ugent.be>
- Date: Fri, 27 Feb 2009 09:07:01 +0100 (CET)
- To: "Kei Cheung" <kei.cheung@yale.edu>
- Cc: "public-semweb-lifesci hcls" <public-semweb-lifesci@w3.org>
Kei, would it be possible to get your slides? do you know if the material disucussed during the C-SHALS will be available? thanks, Erick > I gave the following neuroscience URI examples in my biordf talk at > C-SHALS yesterday. > > http://dbpedia.org/resource/Dopamine_receptor > http://purl.org/ycmi/senselab/neuron_ontology.owl#Dopaminergic_Receptor > http://purl.org/nif/ontology/NIF-Molecule.owl#nifext_5832 > > I pointed out that the last one might be a possible solution. There > might be hope. :-) > > -Kei > > > Alan Ruttenberg wrote: > >>So I count three different sets of URIs for NCBI taxonomy so far. :( >>-Alan >> >>On Fri, Feb 27, 2009 at 11:37 AM, Chris Mungall <cjm@berkeleybop.org> >> wrote: >> >> >>>also.. >>> >>>part of the NCBI taxonomy is in NIF Organism: >>> >>>http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl >>> >>>See also: >>> >>> https://wiki.neuinfo.org/xwiki/bin/view/Main/NIFSTDoverview >>> http://neuinfo.org >>> >>> >>>On Feb 25, 2009, at 4:17 PM, andrea splendiani (RRes-Roth) wrote: >>> >>> >>> >>>>Thanks! >>>> >>>>It'2 240M, but compressed is only 9. >>>>I wonder whether there is some architecture to transparently transfer >>>>compressed ontologies... >>>> >>>>Ciao, >>>>Andrea >>>> >>>>-----Original Message----- >>>>From: Chris Mungall [mailto:cjm@berkeleybop.org] >>>>Sent: 25 February 2009 20:53 >>>>To: andrea splendiani (RRes-Roth) >>>>Cc: public-semweb-lifesci hcls >>>>Subject: Re: Is there an NCBI taxonomy in OWL ? >>>> >>>> >>>>On Feb 25, 2009, at 11:58 AM, Andrea Splendiani wrote: >>>> >>>> >>>> >>>>>Hi, >>>>> >>>>>I was looking for an NCBI Taxnomoy in OWL, but I didn't find it (or >>>>>better, could find fragment from other projects...) >>>>> >>>>>What is strange though, is that on the obo foundry website >>>>>(berkeleybop.org/ontologies) there are notes on the ncbi taxonomy >>>>>representation in owl... but not the representation itself. >>>>> >>>>> >>>>Temporarily dropped from the summary page but still available at the >>>>usual URL >>>>http://purl.org/obo/owl/NCBITaxon >>>> >>>>(warning: large..) >>>> >>>> >>>> >>>>>Does anybody have some hint about where I can fin an OWL version ? >>>>>Or even an RDF version ? Even better would a sparql endpoint >>>>>containing it... >>>>> >>>>>best, >>>>>Andrea Splendiani >>>>> >>>>> >>>>> >>>>> >>>>> >>>> >>>> >>> >>> >>> >> >> >> > > >
Received on Friday, 27 February 2009 17:35:50 UTC