- From: Kei Cheung <kei.cheung@yale.edu>
- Date: Fri, 27 Feb 2009 07:38:48 -0500
- To: erant@psb.vib-ugent.be
- CC: public-semweb-lifesci hcls <public-semweb-lifesci@w3.org>
I think the slides of the HCLS tutorial session at C-SHALS might be availlable to public. The C-SHALS organizers (e.g., Susie) con confirm. If not, I can make my slides available through the BioRDF site. Thanks, -Kei Erick Antezana wrote: >Kei, > > would it be possible to get your slides? do you know if the material >disucussed during the C-SHALS will be available? > >thanks, >Erick > > > >>I gave the following neuroscience URI examples in my biordf talk at >>C-SHALS yesterday. >> >>http://dbpedia.org/resource/Dopamine_receptor >>http://purl.org/ycmi/senselab/neuron_ontology.owl#Dopaminergic_Receptor >>http://purl.org/nif/ontology/NIF-Molecule.owl#nifext_5832 >> >>I pointed out that the last one might be a possible solution. There >>might be hope. :-) >> >>-Kei >> >> >>Alan Ruttenberg wrote: >> >> >> >>>So I count three different sets of URIs for NCBI taxonomy so far. :( >>>-Alan >>> >>>On Fri, Feb 27, 2009 at 11:37 AM, Chris Mungall <cjm@berkeleybop.org> >>>wrote: >>> >>> >>> >>> >>>>also.. >>>> >>>>part of the NCBI taxonomy is in NIF Organism: >>>> >>>>http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Organism.owl >>>> >>>>See also: >>>> >>>>https://wiki.neuinfo.org/xwiki/bin/view/Main/NIFSTDoverview >>>>http://neuinfo.org >>>> >>>> >>>>On Feb 25, 2009, at 4:17 PM, andrea splendiani (RRes-Roth) wrote: >>>> >>>> >>>> >>>> >>>> >>>>>Thanks! >>>>> >>>>>It'2 240M, but compressed is only 9. >>>>>I wonder whether there is some architecture to transparently transfer >>>>>compressed ontologies... >>>>> >>>>>Ciao, >>>>>Andrea >>>>> >>>>>-----Original Message----- >>>>>From: Chris Mungall [mailto:cjm@berkeleybop.org] >>>>>Sent: 25 February 2009 20:53 >>>>>To: andrea splendiani (RRes-Roth) >>>>>Cc: public-semweb-lifesci hcls >>>>>Subject: Re: Is there an NCBI taxonomy in OWL ? >>>>> >>>>> >>>>>On Feb 25, 2009, at 11:58 AM, Andrea Splendiani wrote: >>>>> >>>>> >>>>> >>>>> >>>>> >>>>>>Hi, >>>>>> >>>>>>I was looking for an NCBI Taxnomoy in OWL, but I didn't find it (or >>>>>>better, could find fragment from other projects...) >>>>>> >>>>>>What is strange though, is that on the obo foundry website >>>>>>(berkeleybop.org/ontologies) there are notes on the ncbi taxonomy >>>>>>representation in owl... but not the representation itself. >>>>>> >>>>>> >>>>>> >>>>>> >>>>>Temporarily dropped from the summary page but still available at the >>>>>usual URL >>>>>http://purl.org/obo/owl/NCBITaxon >>>>> >>>>>(warning: large..) >>>>> >>>>> >>>>> >>>>> >>>>> >>>>>>Does anybody have some hint about where I can fin an OWL version ? >>>>>>Or even an RDF version ? Even better would a sparql endpoint >>>>>>containing it... >>>>>> >>>>>>best, >>>>>>Andrea Splendiani >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> >>>>> >>>>> >>>> >>>> >>>> >>> >>> >>> >> >> >> > > > >
Received on Friday, 27 February 2009 12:42:42 UTC