- From: Steve Perry <sperry@jumpernetworks.com>
- Date: Wed, 28 May 2008 09:05:19 -0700
- To: public-semweb-lifesci@w3.org,
The use of ontologies, whether they are industry standards or master data, can facilitate data mapping by providing a more commonly understood language. If both source and target systems map thier low-level schema into a commonly shared ontology this can facilitate (semi)automated data mapping. I say semi-automated becuase in OWLs current state it does not provide data profiles needed for cleansing the data structure. Steve On Wed, 28 May 2008 14:58:32 +0100 Xiaoshu Wang <wangxiao@musc.edu> wrote: > > Huajun Chen@Zhejiang University wrote: > > Another challenge is cross-language data integration, > which is actually a > > job that ontology should do. > > > I honestly disagree. Ontology is about the semantics of > *being* but that > of symbols. It doesn't matter if how "gene" is called, > named, or > written. It symbolize the same objective entities. A URI > such as > http://www.example.com is not written in English. It is > just a bunch of > symbols. Let's not introduce linguistic issues into data > integration, > which already have a lot of issues. > > Xiaoshu Wang > > Best wishes, huajun > > > > -----邮件原件----- > > 发件人: public-semweb-lifesci-request@w3.org > > [mailto:public-semweb-lifesci-request@w3.org] 代表 > Matthias Samwald > > 发送时间: 2008年5月26日 21:22 > > 收件人: kc28@email.med.yale.edu; Tim Clark > > 抄送: M. Scott Marshall; public-semweb-lifesci@w3.org > > 主题: Re: KB note > > > > > > > >> Speaking of national boundaries, I wonder if > alternative medicine (e.g., > >> herbal > >> medicine) would also be of interest to this community. > For example, > >> Huperzine > >> is a drug derived from the herb Huperzia serrata. I > also wonder if there > >> are > >> hypotheses regarding the study of herbs in the > possible treatment of > >> neurological diseases. > >> > > > > I would also be very motivated to help in this kind of > research. > > Specifically, Huperzine A would be a very interesting > use-case for our > > developments. It is a herbal compound with a history in > folk medicine and is > > > > available OTC in most countries, yet it rivals the > effectiveness of > > currently leading Alzheimer medications such as > Tacrine. It also has a dual > > mode of action that does not only involve > acetylcholinesterase inhibition, > > but also modulation of the NMDA receptor. The > implications of this for the > > treatment of Alzheimer's are still a rather hot topic. > > > > The integration of knowledge from traditional medicine, > plant > > taxonomy/phylogeny/biochemistry and receptor binding > databases (PDSP Ki > > database, IUPHAR) could lead to the identification of > some extremely novel > > therapeutic strategies. Finding candidate molecules in > such a way might be > > much more effective than weeding through libraries of > compounds generated by > > > > combinatorial synthesis etc. The challenge lies in the > integration of some > > very heterogenous datasets that come from vastly > different disciplines, > > which is exactly the field of research where Semantic > Web technologies are > > most effective. > > > > I guess the major problem for this kind of research is > that there are no > > funding programmes that span China, the US and Asia... > > > > Cheers, > > Matthias Samwald > > > > DERI Galway, Ireland // Semantic Web Company, Austria > > http://www.deri.ie/ > > http://www.semantic-web.at/ > > > > > > > > > > > > >
Received on Thursday, 29 May 2008 00:22:50 UTC