broken links and other publication logistics for the KB and SenseLab documents

Alan, I believe you are the interface for these unregistered PURLS.
  http://purl.org/commons/hcls/goa
  http://purl.org/science/protein/subjects/
  http://purl.org/science/record/homologene/cluster_r54_99949

The third one requires a rewrite rule and I haven't gotten my purl
account (ericP)approved so I can't fiddle with the interfaces.

(If we tried to use SC's existing purl page, we resolve
<cluster_r54_99949> against
<http://sw.neurocommons.org/cgi-bin/about-303?ref=/science/protein/bysequence/>,
giving us <http://sw.neurocommons.org/cgi-bin/r54_99949>

http://hcls1.csail.mit.edu:8890/map/ is now broken. Is there an update
for this linke? or should we remove reference:
[[
<p>Below are a few visual interfaces that make it possible to browse the results of a search on the knowledgebase:</p>
<ul>
  <li><a href="http://hcls1.csail.mit.edu:8890/map/#Kcnip3@2850,Kcnd1@2800">Prototype of a Google-Maps interface</a> to the Allen Brain Atlas.</li>
  ...
]]

http://svn.neurocommons.org/svn/ gives a 500 error. Is that script broken?



Scott, did you mean to include snapshots of all the RDF and OWL data
in the publication? I saw lots of broken relative links from Appendix
A RDF Sources.
  bams-from-swanson-98-4-23-07.owl
  senselab.tgz
  mesh07-eswc06.rdfs
  medline/medline-mesh.tgz
  homologene.tgz
  goa-in-owl.tgz
  mesh-qualified-headings.ttl.gz
  sciencecommons.owl
  neurocommons-text-mining.tgz
  aba-2007-08-07.tgz
  mesh-skos.tgz
  gene-pubmed.ttl.tgz
  galen.tgz
  obo-in-owl.tgz
  obo-all.tgz
  addgene.ttl
  medline/medline-titles.tgz
  gene-owl.tgz

I found the first one at
  http://hissa.nist.gov/jb/biordf-demo/bams-from-swanson-98-4-23-07.owl
but decided that you might have plans for the bulk of these.


Note to self:
http://www.ebi.ac.uk/ego/DisplayGoTerm is broken right now. I'm hoping
that's transient, and will resolve itself by Monday.


All:
Sorry about the publication delays. I think we can publish on Monday if all
of these get resolved. Here are the SOTDs I have queued:

KB
[[
This is a First Public Working Draft of the Semantic Web in Health
Care and Life Sciences Interest Group (HCLS), part of the W3C Semantic
Web Activity. This document documents the construction and use of the
HCLS Knowledgebase used in the WWW2007 Banff HCLS Demo. It describes
the process for creating a bilogical database on the Semantic Web.

Please send all comments on either of these documents to
public-semweb-lifesci@w3.org, a mailing list with a public archive,
though the IG does not promise explicit responses to each
comment. Publication of this document as an Interest Group Note is
planned for early April 2008; timely comments are appreciated. Areas
marked with "@@" are known to be incomplete, however, any suggestions
in these areas are still appreciated.
]]

SenseLab
[[
This is a First Public Working Draft of the Semantic Web in Health
Care and Life Sciences Interest Group (HCLS), part of the W3C Semantic
Web Activity. This document serves as a companion to the HCLSIG
Knowldege Base and describes the process for integrating new data into
an existing bilogical fdatabase.

Please send all comments on either of these documents to
public-semweb-lifesci@w3.org, a mailing list with a public archive,
though the IG does not promise explicit responses to each
comment. Publication of this document as an Interest Group Note is
planned for early April 2008; timely comments are appreciated.
]]

If anyone would like to invite particular feedback on parts of these
documents, I should put that in the SOTD.
-- 
-eric

office: +1.617.258.5741 32-G528, MIT, Cambridge, MA 02144 USA
mobile: +1.617.599.3509

(eric@w3.org)
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