RE: [COI] Clinical Observations Interoperability Telcon January 15 2008

Alessio,

Thanks for your help. We would like to apply your tools and techniques
to come up with HL7 compliant descroptions of eligibility criteria 
in a clinical trial.

The crucial issue is that the descriptions generated would include 
vocabulary domains, value sets and possible bindings to terminologies
such as Snomed. So it is not a RIM issue alone.

This URL contains a list of the data requirements and some modeling constructs
that have been identified so far.

http://esw.w3.org/topic/HCLS/ClinicalObservationsInteroperability/RIMRDFOWL?acti
on=AttachFile&do=get&target=ModelingConstructsForDiabetesData.xls

Would be great if you could help us fill up the various tabs corresponding to
HL7/RIM
and CDA.

Cheers,

---Vipul
 

> -----Original Message-----
> From: public-semweb-lifesci-request@w3.org 
> [mailto:public-semweb-lifesci-request@w3.org] On Behalf Of 
> Alessio Carenini
> Sent: Tuesday, January 15, 2008 11:10 AM
> To: helen.chen@agfa.com
> Cc: public-semweb-lifesci@w3.org
> Subject: Re: [COI] Clinical Observations Interoperability 
> Telcon January 15 2008
> 
> 
> Hi,
> my master thesis consisted in developing a semantic interoperability
> system for HL7 v.3. Although not all the targets have been 
> reached, I've
> developed both a lifting algorithm from HL7 XML documents to RDF and a
> set of scripts that build a hierarchy of ontologies, from the RIM down
> to the HMDs by using the MIF files provided with the HL7 ballots.
> The development of the scripts has stopped since I got the degree, if
> you're interested I can provide some help.
> The project website is http://veggente.berlios.de/index-en.html
> And the files are in the public svn repository of the project.
> 
> Regards
> Alessio
> 
> 
> [Tue, Jan 15, 2008 at 10:55:54AM -0500] - helen.chen@agfa.com scrive:
> >    Vipul and all
> >    Sorry I will not be able to dial in today due to a time conflict.
> >    I started to put up a wiki to examine some previous effort on
> >    converting RIM/CDA  to RDF/OWL for semantic web 
> reasoning.  The page is
> >    here
> >    
> http://esw.w3.org/topic/HCLS/ClinicalObservationsInteroperabil
> ity/HL7CD
> >    A2OWL.html?action=show
> >    I will add more content later this afternoon.   Please 
> feel free to add
> >    links if you know a good ontology version of RIM/CDA.
> >    Regards.
> >    Helen
> > 
> >    "Kashyap, Vipul" <VKASHYAP1@PARTNERS.ORG>
> >    Sent by: public-semweb-lifesci-request@w3.org
> > 
> >    01/13/2008 11:23 PM
> > 
> >                                                             
>             To
> > 
> >    "Kashyap, Vipul" <VKASHYAP1@PARTNERS.ORG>, 
> <public-hcls-dse@w3.org>,
> >    "public-semweb-lifesci hcls" 
> <public-semweb-lifesci@w3.org>, "Stanley
> >    Huff" <Stan.Huff@intermountainmail.org>, "Yan Heras"
> >    <Yan.Heras@intermountainmail.org>, "Oniki, Tom (GE Healthcare,
> >    consultant)" <Tom.Oniki@ge.com>, "Joey Coyle" <joey@xcoyle.com>,
> >    "Landen Bain" <lbain@topsailtech.com>, "Bron W. Kisler"
> >    <bkisler@earthlink.net>, "Rucker, Donald (MED US)"
> >    <donald.rucker@siemens.com>, "Bulusu, Vijay" 
> <Vijay.Bulusu@pfizer.com>,
> >    <charles.hand@bms.com>, <Pathak.Jyotishman@mayo.edu>, 
> "Allen, George O"
> >    <geoallen@iupui.edu>, <Robin.A.McEntire@gsk.com>,
> >    <john.madden@duke.edu>, <marcus.collins@novartis.com>,
> >    <akamauu@remedymd.com>, <cparker@remedymd.com>, "Chintan Patel"
> >    <chintan.patel@dbmi.columbia.edu>, "Valenzuela, Miguel"
> >    <miguel.valenzuela@roche.com>, "Dan Corwin" <dan@lexikos.com>,
> >    <fostel@niehs.nih.gov>, "Chute, Christopher G., M.D., Ph.D."
> >    <chute@mayo.edu>, "Parsa Mirhaji" <Parsa.Mirhaji@uth.tmc.edu>
> > 
> >                                                             
>             cc
> > 
> >                                                             
>        Subject
> > 
> >    [COI] Clinical Observations Interoperability Telcon 
> January 15 2008
> > 
> >    Phone                    +1 617 761 6200, conference 
> 24668 ("BIONT")
> >    IRC                       irc://irc.w3.org:6665/hcls
> >    Browser-based IRC client [1]http://www.w3.org/2001/01/cgi-irc,
> >                             OR
> >                             [2]http://ircatwork.com,
> >                             Server: irc.w3.org:6665
> >                             Channel: #hcls
> > 
> > 
> >    Agenda:
> > 
> >    1. Roll Call
> >    2. Administrative Issues: Set up New COI mailing List - Eric P
> >    3. Update on Mock Patient Data
> >     (Wiki page set up at:
> >    
> [3]http://esw.w3.org/topic/HCLS/ClinicalObservationsInteropera
> bility/Mo
> >    ckedUpPatientData)
> >    4. Update on Identifying Modeling Constructs for Diabetes Data
> >    Requirements
> >    
> [4]http://esw.w3.org/topic/HCLS/ClinicalObservationsInteropera
> bility/RI
> >    
> MRDFOWL?action=AttachFile&do=get&target=ModelingConstructsForD
iabetesDa
> >    ta.xls
> >    4. Data Requirements for Hypertension Study - George and Sudha
> >    5. Feedback on Brainstorming Document - Vipul
> >    
> [5]http://esw.w3.org/topic/HCLS/ClinicalObservationsInteropera
> bility?ac
> >    tion=AttachFile&do=get&target=BrainstormingSlides.ppt
> >    6. Resource Commitments for COI Project
> >    
> [6]http://esw.w3.org/topic/HCLS/ClinicalObservationsInteropera
> bility/Re
> >    sourceCommitments.html
> >    7. IRB Approval Updates - Vipul, George, Jyoti, Tom, 
> Rachel, Parsa
> > 
> >    Please let me know if you have any other items you would like to
> >    discuss.
> > 
> >    Thanks,
> > 
> >    ---Vipul
> >    The information transmitted in this electronic communication is
> >    intended only
> >    for the person or entity to whom it is addressed and may contain
> >    confidential
> >    and/or privileged material. Any review, retransmission, 
> dissemination
> >    or other
> >    use of or taking of any action in reliance upon this 
> information by
> >    persons or
> >    entities other than the intended recipient is prohibited. If you
> >    received this
> >    information in error, please contact the Compliance HelpLine at
> >    800-856-1983 and
> >    properly dispose of this information.
> > 
> > Riferimenti
> > 
> >    1. http://www.w3.org/2001/01/cgi-irc
> >    2. http://ircatwork.com/
> >    3. 
> http://esw.w3.org/topic/HCLS/ClinicalObservationsInteroperabil
> ity/MockedUpPatientData
> >    4. 
> http://esw.w3.org/topic/HCLS/ClinicalObservationsInteroperabil
> ity/RIMRDFOWL?action=AttachFile&do=get&target=ModelingConstruc
tsForDiabetesData.xls
> >    5. 
> http://esw.w3.org/topic/HCLS/ClinicalObservationsInteroperabil
> ity?action=AttachFile&do=get&target=BrainstormingSlides.ppt
> >    6. 
> http://esw.w3.org/topic/HCLS/ClinicalObservationsInteroperabil
> ity/ResourceCommitments.html
> 
> -- 
> --------------------------------------------
> Alessio Carenini
> CEFRIEL * Politecnico di Milano
> Via Fucini, 2 * 20133 Milano (Italy)
> email: alessio.carenini@cefriel.it
> --------------------------------------------
> 
>

Received on Tuesday, 15 January 2008 18:52:46 UTC