Re: ClinicalTrial Schema

Hi Steve,

Thanks for the information and glad to see that you're making progress.
Please do send an update when the portal comes online. I'd also be
interested in learning more about your ETL pipeline. Having a resource that
brings together the data sources listed on your wiki would be very helpful,
esp. if there is an API available.

Cheers,

Nolan

On Tue, Sep 15, 2020 at 1:57 AM Steve CANHAM <Steve.CANHAM@ecrin.org> wrote:

> Hi Nolan
>
> Just to add a few comments to my colleague’s Christian’s earlier email.
>
>    - By co-incidence, we were completing the revision of the ECRIN
>    metadata schema this week. I have attached a document with the new version
>    of the schema (v4) together with appendices that summarise the values used
>    for the category questions. (The Zenodo reference has been updated as
>    well). The changes are not huge but are summarised at
>    https://ecrin-mdr.online/index.php/JSON_files_v3_to_v4_changes
>    <https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fecrin-mdr.online%2Findex.php%2FJSON_files_v3_to_v4_changes&data=02%7C01%7C%7C8dd163537e7c4d65f03f08d858c1abbd%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C637356936127477150&sdata=9meKwOvX8qCnrjI9z%2FAsYbr7fpbw9pvkyToBG5Iifss%3D&reserved=0>.
>    In particular with this revision we have tried to align the schema more
>    closely with some of the other work in this area, for instance making use
>    of the DUO classification of biomedical consents, and an emerging EOSC
>    classification of document risk.
>    - The current metadata repository (MDR) is several months out of date
>    as far as the data is concerned, though it still illustrates the principle
>    of what we are trying to do.
>    - A new portal – more directly linked to the data source than the
>    current one - is under development and we hope to have that live by October
>    / November.
>    - If you would like any further details – including for instance how
>    the data is structured internally in the database, or how we extract and
>    aggregate the data, (the project wiki is out of date in this respect)
>    please let me know.
>
> Cheers
>
> Steve
>
>
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>