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Re: Bioschemas Validation Meeting

From: Gray, Alasdair <A.J.G.Gray@hw.ac.uk>
Date: Fri, 16 Jul 2021 12:56:27 +0000
To: "public-bioschemas@w3.org" <public-bioschemas@w3.org>, "danbri@danbri.org" <danbri@danbri.org>
Message-ID: <AA6D2D14-0C72-4507-9E0D-98D85B155541@hw.ac.uk>
Hi

Thanks to those who attended the Validation meeting yesterday. We had a really productive session.

Full notes available in the agenda document
https://docs.google.com/document/d/1IcamofWXzeJO87QE_XoGwIdLOKKcAGV3Mp7RplwshfQ/edit#


Below I outline the actions that came out of the meeting. It looks like we have two validation tools that should shortly be available to the community for use, although further development work will continue to be needed.

@danbri@danbri.org<mailto:danbri@danbri.org> we’ll be updating the Bioschemas page with details of software in due course (see first action item).

Best regards

Alasdair
Actions:
Update Bioschemas Software page<https://bioschemas.org/software/> with details of how our existing validators can be used

  *   FAIRchecker (Alban)
  *   ManchesterValidator (Gloria/Alan/Chris)
Update Markup Checking tutorial<https://bioschemas.org/tutorials/howto/howto_check_deploy>

  *   Replace Google SDTT with Schema.org Validator (Alasdair)
  *   Add a Bioschemas Validation section (or separate tutorials linked from the existing one) with
     *   Validation using FAIRchecker (Alban)
     *   Validation using ManchesterValidator (Gloria/Alan/Chris)
Investigate using Data Discovery Engine for profile development (Alasdair/Ginger)



--
Alasdair J G Gray
Associate Professor in Computer Science,
School of Mathematical and Computer Sciences
Heriot-Watt University, Edinburgh, UK.

Email: A.J.G.Gray@hw.ac.uk<mailto:A.J.G.Gray@hw.ac.uk>
Web: http://www.macs.hw.ac.uk/~ajg33

ORCID: http://orcid.org/0000-0002-5711-4872

Office: Earl Mountbatten Building 1.39
Twitter: @gray_alasdair


Heriot-Watt is a global University, as a result my working hours may not be your working hours. Do not feel pressure to reply to this email outside your working hours.


To arrange a meeting: https://outlook.office365.com/owa/calendar/AlasdairGray@heriotwatt.onmicrosoft.com/bookings/


From: "danbri@danbri.org" <danbri@danbri.org>
Date: Tuesday, 13 July 2021 at 09:55
To: Alasdair Gray <A.J.G.Gray@hw.ac.uk>
Cc: "public-bioschemas@w3.org" <public-bioschemas@w3.org>
Subject: Re: Bioschemas Validation Meeting

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I can’t make it on Thursday but it would be incredibly useful to have a single place that points to any/all known systems that consume (i.e. parse/extract and do something) data that includes bioschemas vocabulary.  Ideally with shacl or shex definitions but even just natural language would be fantastic.

For generic validation of json-ld syntax, rdfa, microdata syntax etc hopefully validator.schema.org<http://validator.schema.org> will meet basic needs, although I hope pure opensource tools will converge too.

Looking forward to reading the notes,

Dan

On Tue, 13 Jul 2021 at 09:34, Gray, Alasdair <A.J.G.Gray@hw.ac.uk<mailto:A.J.G.Gray@hw.ac.uk>> wrote:
Hi All,

Just a wee reminder of the validation meeting taking place on Thursday. Details in email below.

Please remember to register for the event.

Best regards

Alasdair

--
Alasdair J G Gray
Associate Professor in Computer Science,
School of Mathematical and Computer Sciences
Heriot-Watt University, Edinburgh, UK.

Email: A.J.G.Gray@hw.ac.uk<mailto:A.J.G.Gray@hw.ac.uk>
Web: http://www.macs.hw.ac.uk/~ajg33

ORCID: http://orcid.org/0000-0002-5711-4872

Office: Earl Mountbatten Building 1.39
Twitter: @gray_alasdair


Heriot-Watt is a global University, as a result my working hours may not be your working hours. Do not feel pressure to reply to this email outside your working hours.


To arrange a meeting: https://outlook.office365.com/owa/calendar/AlasdairGray@heriotwatt.onmicrosoft.com/bookings/


From: Alasdair Gray <A.J.G.Gray@hw.ac.uk<mailto:A.J.G.Gray@hw.ac.uk>>
Date: Wednesday, 23 June 2021 at 09:08
To: "public-bioschemas@w3.org<mailto:public-bioschemas@w3.org>" <public-bioschemas@w3.org<mailto:public-bioschemas@w3.org>>
Subject: Bioschemas Validation Meeting
Resent from: "public-bioschemas@w3.org<mailto:public-bioschemas@w3.org>" <public-bioschemas@w3.org<mailto:public-bioschemas@w3.org>>
Resent date: Wednesday, 23 June 2021 at 09:07

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Caution: This email originated from a sender outside Heriot-Watt University.
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Hi

We are organising a community meeting focused on discussing matters pertaining to validating markup on sites.
Time: 14:00-16:00(UTC)/15:00-17:00(BST)/16:00-18:00(CEST)/07:00-09:00(PDT)
Date: 15 July 2021

Full details on the following web page. Note that the agenda is not fixed, but we plan to discuss current available validators, what we want from a validator, and how to achieve that.
https://bioschemas.org/meetings/2021-07-15_Validation/


Everyone is welcome. Please register through this zoom link
https://zoom.us/meeting/register/tJAvcOytqjkiHd3nOmBeJQ7dM83RQUWdBRIx


Best regards

Alasdair

--
Alasdair J G Gray
Associate Professor in Computer Science,
School of Mathematical and Computer Sciences
Heriot-Watt University, Edinburgh, UK.

Email: A.J.G.Gray@hw.ac.uk<mailto:A.J.G.Gray@hw.ac.uk>
Web: http://www.macs.hw.ac.uk/~ajg33

ORCID: http://orcid.org/0000-0002-5711-4872

Office: Earl Mountbatten Building 1.39
Twitter: @gray_alasdair


Heriot-Watt is a global University, as a result my working hours may not be your working hours. Do not feel pressure to reply to this email outside your working hours.


To arrange a meeting: https://outlook.office365.com/owa/calendar/AlasdairGray@heriotwatt.onmicrosoft.com/bookings/

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Received on Friday, 16 July 2021 12:56:44 UTC

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