- From: Chen Li <chenli@ebi.ac.uk>
- Date: Wed, 17 May 2006 18:05:53 +0100
- To: www-rdf-validator@w3.org
report=Hi, Thank you in advance. The following file we validated on different machine by this same validator. But the result on one machine shows successfully validated. And the result on another machine shows: error ----------------------- Parser Loading Error Exception parsing: {E301} Attribute name "rd" associated with an element type "bp:openControlledVocabulary" must be followed by the ' = ' character. file --------------------------------------- <?xml version="1.0" encoding="UTF-8"?> <rdf:RDF xmlns:owl="http://www.w3.org/2002/07/owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:xs="http://www.w3.org/2001/XMLSchema#" xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns="http://www.ebi.ac.uk/biomodels/sbml2biopax#" xml:base="http://www.ebi.ac.uk/biomodels/biopax"> <owl:Ontology xmlns:owl="http://www.w3.org/2002/07/owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about=""> <owl:imports rdf:resource="http://www.biopax.org/release/biopax-level2.owl"/> </owl:Ontology> <bp:openControlledVocabulary xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rd f:ID="comp1"> <bp:TERM>compartment1</bp:TERM> </bp:openControlledVocabulary> <bp:physicalEntity xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="BLL" > <bp:Name>BasalACh2</bp:Name> </bp:physicalEntity> <bp:physicalEntity xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="IL"> <bp:Name>IntermediateACh</bp:Name> </bp:physicalEntity> <bp:physicalEntity xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="AL"> <bp:Name>ActiveACh</bp:Name> </bp:physicalEntity> <bp:physicalEntity xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="A"> <bp:Name>Active</bp:Name> </bp:physicalEntity> <bp:physicalEntity xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="BL"> <bp:Name>BasalACh</bp:Name> </bp:physicalEntity> <bp:physicalEntity xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="B"> <bp:Name>Basal</bp:Name> </bp:physicalEntity> <bp:physicalEntity xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="DLL"> <bp:Name>DesensitisedACh2</bp:Name> </bp:physicalEntity> <bp:physicalEntity xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="D"> <bp:Name>Desensitised</bp:Name> </bp:physicalEntity> <bp:physicalEntity xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="ILL"> <bp:Name>IntermediateACh2</bp:Name> </bp:physicalEntity> <bp:physicalEntity xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="DL"> <bp:Name>DesensitisedACh</bp:Name> </bp:physicalEntity> <bp:physicalEntity xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="I"> <bp:Name>Intermediate</bp:Name> </bp:physicalEntity> <bp:physicalEntity xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="ALL"> <bp:Name>ActiveACh2</bp:Name> </bp:physicalEntity> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React0"> <bp:Name>React0</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React0_LEFT_B"> <bp:PHYSICAL-ENTITY rdf:resource="#B"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React0_RIGHT_BL"> <bp:PHYSICAL-ENTITY rdf:resource="#BL"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React1"> <bp:Name>React1</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React1_LEFT_BL"> <bp:PHYSICAL-ENTITY rdf:resource="#BL"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React1_RIGHT_BLL"> <bp:PHYSICAL-ENTITY rdf:resource="#BLL"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React2"> <bp:Name>React2</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React2_LEFT_BLL"> <bp:PHYSICAL-ENTITY rdf:resource="#BLL"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React2_RIGHT_ALL"> <bp:PHYSICAL-ENTITY rdf:resource="#ALL"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React3"> <bp:Name>React3</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React3_LEFT_A"> <bp:PHYSICAL-ENTITY rdf:resource="#A"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React3_RIGHT_AL"> <bp:PHYSICAL-ENTITY rdf:resource="#AL"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React4"> <bp:Name>React4</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React4_LEFT_AL"> <bp:PHYSICAL-ENTITY rdf:resource="#AL"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React4_RIGHT_ALL"> <bp:PHYSICAL-ENTITY rdf:resource="#ALL"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React5"> <bp:Name>React5</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React5_LEFT_B"> <bp:PHYSICAL-ENTITY rdf:resource="#B"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React5_RIGHT_A"> <bp:PHYSICAL-ENTITY rdf:resource="#A"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React6"> <bp:Name>React6</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React6_LEFT_BL"> <bp:PHYSICAL-ENTITY rdf:resource="#BL"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React6_RIGHT_AL"> <bp:PHYSICAL-ENTITY rdf:resource="#AL"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React7"> <bp:Name>React7</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React7_LEFT_I"> <bp:PHYSICAL-ENTITY rdf:resource="#I"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React7_RIGHT_IL"> <bp:PHYSICAL-ENTITY rdf:resource="#IL"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React8"> <bp:Name>React8</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React8_LEFT_IL"> <bp:PHYSICAL-ENTITY rdf:resource="#IL"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React8_RIGHT_ILL"> <bp:PHYSICAL-ENTITY rdf:resource="#ILL"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React9"> <bp:Name>React9</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React9_LEFT_A"> <bp:PHYSICAL-ENTITY rdf:resource="#A"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React9_RIGHT_I"> <bp:PHYSICAL-ENTITY rdf:resource="#I"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React10"> <bp:Name>React10</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React10_LEFT_AL"> <bp:PHYSICAL-ENTITY rdf:resource="#AL"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React10_RIGHT_IL"> <bp:PHYSICAL-ENTITY rdf:resource="#IL"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React11"> <bp:Name>React11</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React11_LEFT_ALL"> <bp:PHYSICAL-ENTITY rdf:resource="#ALL"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React11_RIGHT_ILL"> <bp:PHYSICAL-ENTITY rdf:resource="#ILL"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React12"> <bp:Name>React12</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React12_LEFT_D"> <bp:PHYSICAL-ENTITY rdf:resource="#D"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React12_RIGHT_DL"> <bp:PHYSICAL-ENTITY rdf:resource="#DL"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React13"> <bp:Name>React13</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React13_LEFT_DL"> <bp:PHYSICAL-ENTITY rdf:resource="#DL"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React13_RIGHT_DLL"> <bp:PHYSICAL-ENTITY rdf:resource="#DLL"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React14"> <bp:Name>React14</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React14_LEFT_I"> <bp:PHYSICAL-ENTITY rdf:resource="#I"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React14_RIGHT_D"> <bp:PHYSICAL-ENTITY rdf:resource="#D"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React15"> <bp:Name>React15</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React15_LEFT_IL"> <bp:PHYSICAL-ENTITY rdf:resource="#IL"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React15_RIGHT_DL"> <bp:PHYSICAL-ENTITY rdf:resource="#DL"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> <bp:conversion xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi on_React16"> <bp:Name>React16</bp:Name> <bp:LEFT> <bp:physicalEntityParticipant rdf:ID="React16_LEFT_ILL"> <bp:PHYSICAL-ENTITY rdf:resource="#ILL"/> </bp:physicalEntityParticipant> </bp:LEFT> <bp:RIGHT> <bp:physicalEntityParticipant rdf:ID="React16_RIGHT_DLL"> <bp:PHYSICAL-ENTITY rdf:resource="#DLL"/> </bp:physicalEntityParticipant> </bp:RIGHT> </bp:conversion> </rdf:RDF>
Received on Thursday, 18 May 2006 05:30:51 UTC