- From: Chen Li <chenli@ebi.ac.uk>
- Date: Wed, 17 May 2006 18:05:53 +0100
- To: www-rdf-validator@w3.org
report=Hi,
Thank you in advance.
The following file we validated on different machine by this same validator.
But the result on one machine shows successfully validated. And the
result on another machine shows:
error
-----------------------
Parser Loading Error
Exception parsing: {E301} Attribute name "rd" associated with an element
type "bp:openControlledVocabulary" must be followed by the ' = ' character.
file
---------------------------------------
<?xml version="1.0" encoding="UTF-8"?>
<rdf:RDF
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:xs="http://www.w3.org/2001/XMLSchema#"
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns="http://www.ebi.ac.uk/biomodels/sbml2biopax#"
xml:base="http://www.ebi.ac.uk/biomodels/biopax">
<owl:Ontology xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:about="">
<owl:imports
rdf:resource="http://www.biopax.org/release/biopax-level2.owl"/>
</owl:Ontology>
<bp:openControlledVocabulary
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rd
f:ID="comp1">
<bp:TERM>compartment1</bp:TERM>
</bp:openControlledVocabulary>
<bp:physicalEntity
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="BLL"
>
<bp:Name>BasalACh2</bp:Name>
</bp:physicalEntity>
<bp:physicalEntity
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="IL">
<bp:Name>IntermediateACh</bp:Name>
</bp:physicalEntity>
<bp:physicalEntity
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="AL">
<bp:Name>ActiveACh</bp:Name>
</bp:physicalEntity>
<bp:physicalEntity
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="A">
<bp:Name>Active</bp:Name>
</bp:physicalEntity>
<bp:physicalEntity
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="BL">
<bp:Name>BasalACh</bp:Name>
</bp:physicalEntity>
<bp:physicalEntity
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="B">
<bp:Name>Basal</bp:Name>
</bp:physicalEntity>
<bp:physicalEntity
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="DLL">
<bp:Name>DesensitisedACh2</bp:Name>
</bp:physicalEntity>
<bp:physicalEntity
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="D">
<bp:Name>Desensitised</bp:Name>
</bp:physicalEntity>
<bp:physicalEntity
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="ILL">
<bp:Name>IntermediateACh2</bp:Name>
</bp:physicalEntity>
<bp:physicalEntity
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="DL">
<bp:Name>DesensitisedACh</bp:Name>
</bp:physicalEntity>
<bp:physicalEntity
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="I">
<bp:Name>Intermediate</bp:Name>
</bp:physicalEntity>
<bp:physicalEntity
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="ALL">
<bp:Name>ActiveACh2</bp:Name>
</bp:physicalEntity>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React0">
<bp:Name>React0</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React0_LEFT_B">
<bp:PHYSICAL-ENTITY rdf:resource="#B"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React0_RIGHT_BL">
<bp:PHYSICAL-ENTITY rdf:resource="#BL"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React1">
<bp:Name>React1</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React1_LEFT_BL">
<bp:PHYSICAL-ENTITY rdf:resource="#BL"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React1_RIGHT_BLL">
<bp:PHYSICAL-ENTITY rdf:resource="#BLL"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React2">
<bp:Name>React2</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React2_LEFT_BLL">
<bp:PHYSICAL-ENTITY rdf:resource="#BLL"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React2_RIGHT_ALL">
<bp:PHYSICAL-ENTITY rdf:resource="#ALL"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React3">
<bp:Name>React3</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React3_LEFT_A">
<bp:PHYSICAL-ENTITY rdf:resource="#A"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React3_RIGHT_AL">
<bp:PHYSICAL-ENTITY rdf:resource="#AL"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React4">
<bp:Name>React4</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React4_LEFT_AL">
<bp:PHYSICAL-ENTITY rdf:resource="#AL"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React4_RIGHT_ALL">
<bp:PHYSICAL-ENTITY rdf:resource="#ALL"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React5">
<bp:Name>React5</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React5_LEFT_B">
<bp:PHYSICAL-ENTITY rdf:resource="#B"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React5_RIGHT_A">
<bp:PHYSICAL-ENTITY rdf:resource="#A"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React6">
<bp:Name>React6</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React6_LEFT_BL">
<bp:PHYSICAL-ENTITY rdf:resource="#BL"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React6_RIGHT_AL">
<bp:PHYSICAL-ENTITY rdf:resource="#AL"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React7">
<bp:Name>React7</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React7_LEFT_I">
<bp:PHYSICAL-ENTITY rdf:resource="#I"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React7_RIGHT_IL">
<bp:PHYSICAL-ENTITY rdf:resource="#IL"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React8">
<bp:Name>React8</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React8_LEFT_IL">
<bp:PHYSICAL-ENTITY rdf:resource="#IL"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React8_RIGHT_ILL">
<bp:PHYSICAL-ENTITY rdf:resource="#ILL"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React9">
<bp:Name>React9</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React9_LEFT_A">
<bp:PHYSICAL-ENTITY rdf:resource="#A"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React9_RIGHT_I">
<bp:PHYSICAL-ENTITY rdf:resource="#I"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React10">
<bp:Name>React10</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React10_LEFT_AL">
<bp:PHYSICAL-ENTITY rdf:resource="#AL"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React10_RIGHT_IL">
<bp:PHYSICAL-ENTITY rdf:resource="#IL"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React11">
<bp:Name>React11</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React11_LEFT_ALL">
<bp:PHYSICAL-ENTITY rdf:resource="#ALL"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React11_RIGHT_ILL">
<bp:PHYSICAL-ENTITY rdf:resource="#ILL"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React12">
<bp:Name>React12</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React12_LEFT_D">
<bp:PHYSICAL-ENTITY rdf:resource="#D"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React12_RIGHT_DL">
<bp:PHYSICAL-ENTITY rdf:resource="#DL"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React13">
<bp:Name>React13</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React13_LEFT_DL">
<bp:PHYSICAL-ENTITY rdf:resource="#DL"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React13_RIGHT_DLL">
<bp:PHYSICAL-ENTITY rdf:resource="#DLL"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React14">
<bp:Name>React14</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React14_LEFT_I">
<bp:PHYSICAL-ENTITY rdf:resource="#I"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React14_RIGHT_D">
<bp:PHYSICAL-ENTITY rdf:resource="#D"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React15">
<bp:Name>React15</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React15_LEFT_IL">
<bp:PHYSICAL-ENTITY rdf:resource="#IL"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React15_RIGHT_DL">
<bp:PHYSICAL-ENTITY rdf:resource="#DL"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
<bp:conversion
xmlns:bp="http://www.biopax.org/release/biopax-level2.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:ID="conversi
on_React16">
<bp:Name>React16</bp:Name>
<bp:LEFT>
<bp:physicalEntityParticipant rdf:ID="React16_LEFT_ILL">
<bp:PHYSICAL-ENTITY rdf:resource="#ILL"/>
</bp:physicalEntityParticipant>
</bp:LEFT>
<bp:RIGHT>
<bp:physicalEntityParticipant rdf:ID="React16_RIGHT_DLL">
<bp:PHYSICAL-ENTITY rdf:resource="#DLL"/>
</bp:physicalEntityParticipant>
</bp:RIGHT>
</bp:conversion>
</rdf:RDF>
Received on Thursday, 18 May 2006 05:30:51 UTC