- From: Andrea Splendiani <andrea.splendiani@iscb.org>
- Date: Sat, 31 Aug 2013 16:53:54 +0100
- To: Carole Goble <carole.goble@manchester.ac.uk>
- Cc: Richard Boyce <rdb20@pitt.edu>, "public-semweb-lifesci@w3.org" <public-semweb-lifesci@w3.org>, Lee Harland <lee@connecteddiscovery.com>
Hi, As far as I know, there is only chemical/genes/pathways integrated in OpenPhacts, at least that can be seen from the website. I was looking for something more comprehensive as I need to cover drugs (commercial names and prescriptions, not their chemistry and mode of action) and medical conditions. best, Andrea Il giorno 31/ago/2013, alle ore 15:24, Carole Goble <carole.goble@manchester.ac.uk> ha scritto: > Did you try > Http://www.openphacts.org > > Carole > > Sent from my iPhone > > On 31 Aug 2013, at 16:03, "Andrea Splendiani" <andrea.splendiani@iscb.org> wrote: > >> Hi, >> >> thanks, this is going to be very useful. >> As for [2], last update was in December, several links seem broken. >> >> In general, I have found several listing of datasets, including ad hoc sites as data.io. But then none provides a guarantee of being maintained, which defeat a bit the point of having a directory. >> Directories are not that successful for web information, but I was wondering whether in our (more restricted) domain there was some consensus/commitment to one. >> >> best, >> Andrea >> >> Il giorno 30/ago/2013, alle ore 13:05, Richard Boyce <rdb20@pitt.edu> ha scritto: >> >>> Hi Andrea, >>> >>> I maintain a resource of all US drug product labeling called LinkedSPLs <http://purl.org/net/linkedspls>. The resource is up to date and contains mappings to bio2rdf, drugbank, NDF-RT, ChEBI, and RxNorm. Drugs with clinical pharmacogenomic statements [1] are included in the FDAPharmgxTable graph (e.g., <http://dbmi-icode-01.dbmi.pitt.edu/linkedSPLs/page/FDAPharmgxTable/1>) with the biomarkers mapped to HGNC, PRO, and PharmGKB. You also might find [2] useful. >>> >>> kind regards, >>> -Rich >>> >>> 1. http://www.fda.gov/Drugs/ScienceResearch/ResearchAreas/Pharmacogenetics/ucm083378.htm >>> >>> 2. http://www.w3.org/wiki/HCLSIG/LODD/Data >>> >>> >>> >>> On 08/30/2013 07:40 AM, Andrea Splendiani wrote: >>>> Hi all, >>>> >>>> I was looking for a few datasets to download in RDF (Mesh, Drugbank...), but when I google for it, I get a lot of indexes/resources (Data.io, w3c wiki, ckan,...) with broken links. >>>> Is there a directory which is known to be up2date ? >>>> >>>> best, >>>> Andrea >>> >>> >>> -- >>> Richard D Boyce, PhD >>> Assistant Professor of Biomedical Informatics >>> Faculty, Geriatric Pharmaceutical Outcomes and Gero-Informatics Research and Training Program >>> University of Pittsburgh >>> rdb20@pitt.edu >>> Office: 412-648-9219 >>> Twitter: @bhaapgh >> >>
Received on Saturday, 31 August 2013 15:54:24 UTC