Re: Links to downloadable Bio Dataset in RDF ?

Hi,

thanks, this is going to be very useful.
As for [2], last update was in December, several links seem broken.

In general, I have found several listing of datasets, including ad hoc sites as data.io. But then none provides a guarantee of being maintained, which defeat a bit the point of having a directory.
Directories are not that successful for web information, but I was wondering whether in our (more restricted) domain there was some consensus/commitment to one.

best,
Andrea

Il giorno 30/ago/2013, alle ore 13:05, Richard Boyce <rdb20@pitt.edu> ha scritto:

> Hi Andrea,
> 
> I maintain a resource of all US drug product labeling called LinkedSPLs <http://purl.org/net/linkedspls>. The resource is up to date and contains mappings to bio2rdf, drugbank, NDF-RT, ChEBI, and RxNorm. Drugs with clinical pharmacogenomic statements [1] are included in the FDAPharmgxTable graph (e.g., <http://dbmi-icode-01.dbmi.pitt.edu/linkedSPLs/page/FDAPharmgxTable/1>) with the biomarkers mapped to HGNC, PRO, and PharmGKB. You also might find [2] useful.
> 
> kind regards,
> -Rich
> 
> 1. http://www.fda.gov/Drugs/ScienceResearch/ResearchAreas/Pharmacogenetics/ucm083378.htm
> 
> 2. http://www.w3.org/wiki/HCLSIG/LODD/Data
> 
> 
> 
> On 08/30/2013 07:40 AM, Andrea Splendiani wrote:
>> Hi all,
>> 
>> I was looking for a few datasets to download in RDF (Mesh, Drugbank...), but when I google for it, I get a lot of indexes/resources (Data.io, w3c wiki, ckan,...) with broken links.
>> Is there a directory which is known to be up2date ?
>> 
>> best,
>> Andrea
> 
> 
> -- 
> Richard D Boyce, PhD
> Assistant Professor of Biomedical Informatics
> Faculty, Geriatric Pharmaceutical Outcomes and Gero-Informatics Research and Training Program
> University of Pittsburgh
> rdb20@pitt.edu
> Office: 412-648-9219
> Twitter: @bhaapgh
> 
>

Received on Saturday, 31 August 2013 14:02:06 UTC