Re: Meeting minutes: Clinical Pharmacogenomics Teleconference

Joanne, Matthias and all,

As you know may know, Mayo Clinic is one of the NIH designated Pharmacogenomics Research Network (PGRN) site, and pharmacogenomics of Major Depressive Disorder is one of the main focus. Our team has made significant progress in developing EHR-based treatment response algorithms for SSRIs, and are currently moving towards replicating the GWAS hits from prior efforts including STAR*D. Hopefully, along this path, we may find novel hits too. Additionally, we are looking at several issues about bidirectionally between depression and other chronic illnesses, and co-therapy management.

While I could not participate in today's meeting due to travel, I hope prior and on-going efforts in this field are taken into consideration.

http://mayoresearch.mayo.edu/mayo/research/ppii/
http://www.ncbi.nlm.nih.gov/pubmed/23324805
http://www.ncbi.nlm.nih.gov/pubmed/22907730

Cheers,
Jyoti


Jyotishman Pathak, PhD
Associate Professor of Medical Informatics
Division of Biomedical Statistics and Informatics
Department of Health Sciences Research
Mayo Clinic
200 1st Street SW, Rochester, MN 55905
Phone: +1-507-538-8384
Fax: +1-507-284-0360
Email: pathak.jyotishman@mayo.edu<mailto:pathak.jyotishman@mayo.edu>
Homepage: http://jyotishman.info

From: Joanne Luciano <jluciano@gmail.com<mailto:jluciano@gmail.com>>
Date: Wednesday, April 3, 2013 10:40 AM
To: Matthias Samwald <matthias.samwald@meduniwien.ac.at<mailto:matthias.samwald@meduniwien.ac.at>>
Cc: "public-semweb-lifesci@w3.org<mailto:public-semweb-lifesci@w3.org>" <public-semweb-lifesci@w3.org<mailto:public-semweb-lifesci@w3.org>>
Subject: Re: Meeting minutes: Clinical Pharmacogenomics Teleconference
Resent-From: <public-semweb-lifesci@w3.org<mailto:public-semweb-lifesci@w3.org>>
Resent-Date: Wednesday, April 3, 2013 10:40 AM

Thanks for this. I am sorry I was unable to make the meeting today. I had two others going on at the same time!
I'm interested in following up on the Depression work (thanks Bob Powers for the Skype note) and will follow-up next week.

Kind regards,
Joanne

On Apr 3, 2013, at 11:32 AM, Matthias Samwald <matthias.samwald@meduniwien.ac.at<mailto:matthias.samwald@meduniwien.ac.at>>
 wrote:

The meeting minutes are available at
http://www.w3.org/2013/04/03-HCLS-minutes.html

Cheers,
Matthias


From: Matthias Samwald<mailto:matthias.samwald@meduniwien.ac.at>
Sent: Wednesday, April 03, 2013 2:56 PM
To: public-semweb-lifesci@w3.org<mailto:public-semweb-lifesci@w3.org>
Subject: Reminder: Clinical Pharmacogenomics Teleconference

This is a reminder of the Clinical Pharmacogenomics Teleconference today at 10:15 Eastern Time (16:15 Central European Time). Here is the suggested agenda:

  *   Jeremy Carroll will present his work on VCF and RDF.
     *   Presentation slides: http://lists.w3.org/Archives/Public/www-archive/2013Apr/att-0002/W3C-JJC-LifeSci.pdf
     *   Topics: business background, Syapse Discovery; some background on VCF as a knowledge representation format; some initial results on mapping 1000 genomes into RDF

  *   Optional: Pharmacogenomics of depression as a potential driving use-case? (Input from Joanne Luciano, Richard Boyce, others)

Meeting:      Clinical Pharmacogenomics
Date:         April 03, 2013
Time:         10:15 Eastern Time (16:15 Central European Time)
Frequency:    1st and 3rd Wednesday of the month
Conveners:    Michel Dumontier, Matthias Samwald
Dial-In #:    +1.617.761.6200 (Cambridge, MA)
VoIP address: sip:zakim@voip.w3.org
Participant   Access Code: 4257 ("HCLS")
IRC Channel:  irc.w3.org<http://irc.w3.org> port 6665 channel #HCLS
URL: http://www.w3.org/wiki/HCLSIG/Pharmacogenomics/Meetings/2013-04-03_Conference_Call

Cheers,
Matthias