- From: conor dowling <conor-dowling@caregraf.com>
- Date: Sat, 17 Sep 2011 20:07:22 -0700
- To: "Hau, Dave (NIH/NCI) [E]" <haudt@mail.nih.gov>
- Cc: Jim McCusker <james.mccusker@yale.edu>, "public-semweb-lifesci@w3.org" <public-semweb-lifesci@w3.org>
- Message-ID: <CALfFB1-OnUOFcG+1dAVXvPXebk46VASB=QuKWCgabzzyvvuxZQ@mail.gmail.com>
The VA's VistA does something on this ... Here's the schema for vitals ala blood pressure ... - http://vista.caregraf.org/schema#!120_5 Two things of note - the type field lists possible vitals http://vista.caregraf.org/rambler#!120_51 - and then there's qualifiers (the last field in 120_5) Qualifiers are bound by vital type. You have many types of qualifier http://vista.caregraf.org/rambler#!120_53 (Location, Site, Quality ...) and each of these - for example, location ( http://vista.caregraf.org/rambler#!120_53-1) defines what vital type (120_51) it can apply to. In other words, the template for Vital covers when, where, who takes ... (120_5) and then depending on the type of measurement, there are appropriate qualifiers. Intermountain's examples seem to be labs. The VA's are here ... http://vista.caregraf.org/rambler#!64. The language is a bit cryptic and specific but as meta-data it works. It seems that there's nothing really new in our talk of models (buckets) and restrictions depending on type. What's new or at least new-for-implementation is a portable language for capturing all this detail. Conor On Sat, Sep 17, 2011 at 6:51 PM, Hau, Dave (NIH/NCI) [E] <haudt@mail.nih.gov > wrote: > Jim, I was thinking more about units of content as in a container storing > properties from different classes, for a clinical purpose. The classic > example here is when an EHR needs to store or report a blood pressure > measurement, what are the various data elements that need to be reported to > provide enough context to interpret the reading.**** > > ** ** > > To get an idea, take a look at the Intermountain CEM explorer:**** > > ** ** > > http://intermountainhealthcare.org/cem**** > > ** ** > > Do a model search for "blood pressure", look at BloodPressurePanel. You'll > see it's a container storing the systolic, diastolic, MAP measurements, and > some info on the method/device, body location, body position, patient > precondition etc.**** > > ** ** > > Same with the OpenEHR knowledge manager:**** > > ** ** > > http://www.openehr.org/knowledge/**** > > ** ** > > Double-click on: Entry > Observation > Blood Pressure**** > > ** ** > > Mark mentioned using SADI - I think maybe you could define a kind of > meta-ontology representing input and output classes in SADI, that would > represent these containers or archetypes. Then you would define REST > interfaces based on that meta-ontology. I think this approach can be > explored.**** > > ** ** > > I need to read up more on the RESTful linked data interface mentioned by > Guoqian. I guess when I think of a REST mechanism for RDF, the challenge > would be, RDF is a graph, whereas the URI resource path mechanism in REST is > a tree, and it could be hard to unfold a graph into a tree...**** > > ** ** > > Mike, yes the section document (or the record itself) is where I envision > the RDF would go. The hData proposal is appealing in that it's simple, and > separates the transport and the content cleanly, so we have good separation > of concern for the appropriate stakeholders (engineers vs. clinicians for > example).**** > > ** ** > > I also saw Chimezie Ogbuji's draft on "SPARQL 1.1 Graph Store HTTP > Protocol" which is also REST based. Wonder if that would be applicable > here?**** > > ** ** > > http://www.w3.org/TR/sparql11-http-rdf-update/**** > > ** ** > > - Dave **** > > ** ** > > ** ** > > ** ** > > *From:* Jim McCusker [mailto:james.mccusker@yale.edu] > *Sent:* Saturday, September 17, 2011 8:07 PM > > *To:* Hau, Dave (NIH/NCI) [E] > *Cc:* conor dowling; public-semweb-lifesci@w3.org > > *Subject:* Re: FW: A Fresh Look Proposal (HL7)**** > > ** ** > > Units of measure have a number of good representations in OWL/RDF. My > current favorite is the Measurement Units Ontology, because it allows for > composition of units from more basic units, it is designed to be used as an > annotation property on properties as well as other configurations.**** > > ** ** > > Jim**** > > On Sat, Sep 17, 2011 at 2:32 PM, Hau, Dave (NIH/NCI) [E] < > haudt@mail.nih.gov> wrote:**** > > Back to "forget the plumbing" and focus on the content, how would you > define a unit of content for a particular purpose (e.g. a blood pressure > reading) in OWL and/or RDF? This would correspond to an archetype or > Detailed Clinical Model (DCM), and would be a subset of the domain > ontology(s).**** > > **** > > I also came across the hData effort which seems very promising:**** > > **** > > http://www.projecthdata.org**** > > **** > > They are proposing a REST mechanism for transport (with some basic HTTP > based security as well), and a generic content format (hData Record Format) > that's primarily XML based currently, but potentially could be adapted to > carry RDF payload. (The REST mechanism claims conformance to the OMG RLUS > profile, with a semantic signifier linking the data to the information > model. IMHO this could potentially be adapted to use RDF instead, that's > linked to concepts in an OWL model.) Is there a REST mechanism to expose > RDF data?**** > > **** > > - Dave**** > > **** > > **** > > **** > > *From:* Jim McCusker [mailto:james.mccusker@yale.edu] > *Sent:* Monday, August 22, 2011 9:40 AM > *To:* conor dowling > *Cc:* Hau, Dave (NIH/NCI) [E]; public-semweb-lifesci@w3.org**** > > > *Subject:* Re: FW: A Fresh Look Proposal (HL7)**** > > **** > > I was just crafting a mail about how our investment in XML technologies > hasn't paid off when this came in. What he said. :-)**** > > On Mon, Aug 22, 2011 at 9:33 AM, conor dowling <conor-dowling@caregraf.com> > wrote:**** > > >> The content matters, the format does not.**** > > **** > > should be front and center. Talk of XML that or JSON this, of RDF as XML in > a chain is a distraction - it's just plumbing. There are many tool-chains > and implementors are big boys - they can graze the buffet themselves. **** > > **** > > Central to any patient model rework (I hope) would be the interplay of > formal specifications for terminologies like SNOMED along with any patient > data information model. What should go in the terminology concept (the > "object" in RDF terms) - what is left in the model (the "predicate"). Right > now, this interplay is woefully under specified and implementors throw just > about any old concept into "appropriate" slots in RIM (I know this from > doing meaningful use tests: > http://www.caregraf.com/blog/being-allergic-to-allergies, > http://www.caregraf.com/blog/there-once-was-a-strawberry-allergy ) BTW, if > SNOMED is the terminology of choice (for most) then the dance of it and any > RIM-2 should drive much of RIM-2's form.**** > > **** > > This is a chance to get away from a fixation on formats/plumbing/"the > trucks for data" and focus on content and in that focus to consider every > aspect of expression, not just the verbs (RIM) or the objects (SNOMED) but > both.**** > > **** > > Back to "forget the plumbing": if you want to publish a patient's data as > an RDF graph or relational tables or you want a "document" to send on a > wire, if you want to query with a custom protocol or use SPARQL or SQL, you > should be able to and not be seen as an outlier. Each can be reduced to > equivalents in other formats for particular interoperability. The problem > right now is that so much time is spent talking about these containers and > working between them and too little time is given over to what they contain, > **** > > **** > > Conor**** > > **** > > On Mon, Aug 22, 2011 at 6:01 AM, Hau, Dave (NIH/NCI) [E] < > haudt@mail.nih.gov> wrote:**** > > I see what you're saying and I agree.**** > > **** > > The appeal of XML (i.e. XML used with an XSD representing model syntactics, > not XML used as a serialization as in RDF/XML) is due in part to:**** > > **** > > - XML schema validation API is available on virtually all platforms e.g. > Java, Javascript, Google Web Toolkit, Android etc.**** > > - XML schema validation is relatively lightweight computationally. Pellet > ICV and similar mechanisms are more complete in their validation with the > model, but much more computationally expensive unless you restrict yourself > to a small subset of OWL which then limits the expressiveness of the > modeling language.**** > > - XML provides a convenient bridge from models such as OWL to relational > databases e.g. via JAXB or Castor to Java objects to Hibernate to any RDB. > **** > > - Relational querying and XML manipulation skills are much more plentiful > in the market than SPARQL skills currently.**** > > - Some of the current HL7 artifacts are expressed in XSD format, such as > their datatypes (ISO 21090 ; although there are alternative representations > such as UML, and there is an abstract spec too from HL7). If we operate > with OWL and RDF exclusively, would need to convert these datatypes into > OWL.**** > > **** > > Maybe it'd be worthwhile to get a few of us who are interested in this > topic together, with some of the HL7 folks interested, and have a few calls > to flush this out and maybe write something up?**** > > **** > > - Dave**** > > **** > > **** > > **** > > **** > > *From:* Jim McCusker [mailto:james.mccusker@yale.edu] > *Sent:* Sunday, August 21, 2011 6:12 PM > *To:* Hau, Dave (NIH/NCI) [E] > *Cc:* public-semweb-lifesci@w3.org > *Subject:* Re: FW: A Fresh Look Proposal (HL7)**** > > **** > > I feel I need to cut to the chase with this one: XML schema cannot validate > semantic correctness.**** > > **** > > It can validate that XML conforms to a particular schema, but that is > syntactic. The OWL validator is nothing like a schema validator, first it > produces a closure of all statements that can be inferred from the asserted > information. This means that if a secondary ontology is used to describe > some data, and that ontology integrates with the ontology that you're > attempting to validate against, you will get a valid result. An XML schema > can only work with what's in front of it.**** > > **** > > Two, there are many different representations of information that go beyond > XML, and it should be possible to validate that information without anything > other than a mechanical, universal translation. For instance, there are a > few mappings of RDF into JSON, including JSON-LD, which looks the most > promising at the moment. Since RDF/XML and JSON-LD both parse to the same > abstract graph, there is a mechanical transformation between them. When > dealing with semantic validity, you want to check the graph that is parsed > from the document, not the document itself.**** > > **** > > The content matters, the format does not. For instance, let me define a new > RDF format called RDF/CSV:**** > > **** > > First column is the subject. First row is the predicate. All other cell > values are objects. URIs that are relative are relative to the document, as > in RDF/XML.**** > > **** > > I can write a parser for that in 1 hour and publish it. It's genuinely > useful, and all you would have to do to read and write it is to use my > parser or write one yourself. I can then use the parser, paired with Pellet > ICV, and validate the information in the file without any additional work > from anyone.**** > > **** > > Maybe we need a simplified XML representation for RDF that looks more like > regular XML. But to make a schema for an OWL ontology is too much work for > too little payoff.**** > > **** > > Jim**** > > On Sun, Aug 21, 2011 at 5:45 PM, Hau, Dave (NIH/NCI) [E] < > haudt@mail.nih.gov> wrote:**** > > Hi all,**** > > **** > > As some of you may have read, HL7 is rethinking their v3 and doing some > brainstorming on what would be a good replacement for a data exchange > paradigm grounded in robust semantic modeling.**** > > **** > > On the following email exchange, I was wondering, if OWL is used for > semantic modeling, are there good ways to accomplish the following:**** > > **** > > 1. Generate a wire format schema (for a subset of the model, the subset > they call a "resource"), e.g. XSD**** > > **** > > 2. Validate XML instances for conformance to the semantic model. (Here > I'm reminded of Clark and Parsia's work on their Integrity Constraint > Validator: http://clarkparsia.com/pellet/icv )**** > > **** > > 3. Map an XML instance conformant to an earlier version of the "resource" > to the current version of the "resource" via the OWL semantic model**** > > **** > > I think it'd be great to get a semantic web perspective on this fresh look > effort.**** > > **** > > Cheers,**** > > Dave**** > > **** > > **** > > **** > > Dave Hau**** > > National Cancer Institute**** > > Tel: 301-443-2545**** > > Dave.Hau@nih.gov**** > > **** > > **** > > **** > > *From:* owner-its@lists.hl7.org [mailto:owner-its@lists.hl7.org] *On > Behalf Of *Lloyd McKenzie > *Sent:* Sunday, August 21, 2011 12:07 PM > *To:* Andrew McIntyre > *Cc:* Grahame Grieve; Eliot Muir; Zel, M van der; HL7-MnM; RIMBAA; HL7 ITS > *Subject:* Re: A Fresh Look Proposal**** > > **** > > Hi Andrew,**** > > **** > > Tacking stuff on the end simply doesn't work if you're planning to use XML > Schema for validation. (Putting new stuff in the middle or the beginning > has the same effect - it's an unrecognized element.) The only alternative > is to say that all changes after "version 1" of the specification will be > done using the extension mechanism. That will create tremendous analysis > paralysis as we try to get things "right" for that first version, and will > result in increasing clunkiness in future versions. Furthermore, the > extension mechanism only works for the wire format. For the RIM-based > description, we still need proper modeling, and that can't work with "stick > it on the end" no matter what.**** > > **** > > That said, I'm not advocating for the nightmare we currently have with v3 > right now.**** > > **** > > I think the problem has three parts - how to manage changes to the wire > format, how to version resource definitions and how to manage changes to the > semantic model.**** > > **** > > Wire format:**** > > If we're using schema for validation, we really can't change anything > without breaking validation. Even making an existing non-repeating element > repeat is going to cause schema validation issues. That leaves us with two > options (if we discount the previously discussed option of "get it right the > first time and be locked there forever":**** > > 1. Don't use schema**** > > - Using Schematron or something else could easily allow validation of the > elements that are present, but ignore all "unexpected" elements**** > > - This would cause significant pain for implementers who like to use schema > to help generate code though**** > > **** > > 2. Add some sort of a version indicator on new content that allows a > pre-processor to remove all "new" content if processing using an "old" > handler**** > > - Unpleasant in that it involves a pre-processing step and adds extra > "bulk" to the instances, but other than that, quite workable**** > > **** > > I think we're going to have to go with option #2. It's not ideal, but is > still relatively painless for implementers. The biggest thing is that we > can insist on "no breaking x-path changes". We don't move stuff between > levels in a resource wire format definition or rename elements in a resource > wire format definition. In the unlikely event we have to deprecate the > entire resource and create a new version.**** > > **** > > Resource versioning:**** > > At some point, HL7 is going to find at least one resource where we blew it > with the original design and the only way to create a coherent wire format > is to break compatibility with the old one. This will then require > definition of a new resource, with a new name that occupies the same > semantic space as the original. I.e. We'll end up introducing "overlap". > Because overlap will happen, we need to figure out how we're going to deal > with it. I actually think we may want to introduce overlap in some places > from the beginning. Otherwise we're going to force a wire format on > implementers of simple community EMRs that can handle prescriptions for > fully-encoded chemo-therapy protocols. (They can ignore some of the data > elements, but they'd still have to support the full complexity of the nested > data structures.)**** > > **** > > I don't have a clear answer here, but I think we need to have a serious > discussion about how we'll handle overlap in those cases where it's > necessary, because at some point it'll be necessary. If we don't figure out > the approach before we start, we can't allow for it in the design.**** > > **** > > All that said, I agree with the approach of avoiding overlap as much as > humanly possible. For that reason, I don't advocate calling the Person > resource "Person_v1" or something that telegraphs we're going to have new > versions of each resource eventually (let alone frequent changes). > Introduction of a new version of a resource should only be done when the > pain of doing so is outweighed by the pain of trying to fit new content in > an old version, or requiring implementers of the simple to support the > structural complexity of our most complex use-cases.**** > > **** > > **** > > Semantic model versioning:**** > > This is the space where "getting it right" the first time is the most > challenging. (I think we've done that with fewer than half of the normative > specifications we've published so far.) V3 modeling is hard. The positive > thing about the RFH approach is that very few people need to care. We could > totally refactor every single resource's RIM-based model (or even remove > them entirely), and the bulk of implementers would go on merrily exchanging > wire syntax instances. However, that doesn't mean the RIM-based > representations aren't important. They're the foundation for the meaning of > what's being shared. And if you want to start sharing at a deeper level > such as RIMBAA-based designs, they're critical. This is the level where OWL > would come in. If you have one RIM-based model structure, and then need to > refactor and move to a different RIM-based model structure, you're going to > want to map the semantics between the two structures so that anyone who was > using the old structure can manage instances that come in with the new > structure (or vice versa). OWL can do that. And anyone who's got a complex > enough implementation to parse the wire format and trace the elements > through the their underlying RIM semantic model will likely be capable of > managing the OWL mapping component as well.**** > > **** > > **** > > In short, I think we're in agreement that separation of wire syntax and > semantic model are needed. That will make model refactoring much easier. > However we do have to address how we're going to handle wire-side and > resource refactoring too.**** > > **** > > **** > > Lloyd**** > > -------------------------------------- > Lloyd McKenzie > > +1-780-993-9501 > > > > Note: Unless explicitly stated otherwise, the opinions and positions > expressed in this e-mail do not necessarily reflect those of my clients nor > those of the organizations with whom I hold governance positions.**** > > On Sun, Aug 21, 2011 at 7:53 AM, Andrew McIntyre < > andrew@medical-objects.com.au> wrote:**** > > Hello Lloyd, > > While "tacking stuff on the end" in V2 may not at first glance seem like an > elegant solution I wonder if it isn't actually the best solution, and one > that has stood the test of time. The parsing rules in V2 do make version > updates quite robust wrt backward and forward inter-operability. > > I am sure it could be done with OWL but I doubt we can switch the world to > using OWL in any reasonable time frame and we probably need a less abstract > representation for commonly used things. In V2 OBX segments, used in a > hierarchy can create an OWL like object-attribute structure for information > that is not modeled by the standard itself. > > I do think the wire format and any overlying model should be distinct > entities so that the model can be evolved and the wire format be changed in > a backward compatible way, at least for close versions. > > I also think that the concept of templates/archetypes to extend the model > should not invalidate the wire format, but be a metadata layer over the wire > format. This is what we have done in Australia with an ISO 13606 Archetypes > in V2 projects. I think we do need a mechanism for people to develop > templates to describe hierarchical data and encode that in the wire format > in a way that does not invalidate its vanilla semantics (ie non templated V2 > semantics) when the template mechanism is unknown or not implemented. > > In a way the V2 specification does hit at underlying objects/Interfaces, > and there is a V2 model, but it is not prescriptive and there is no > requirement for systems to use the same internal model as long as they use > the bare bones V2 model in the same way. Obviously this does not always work > as well as we would like, even in V2, but it does work well enough to use it > for quite complex data when there are good implementation guides. > > If we could separate the wire format from the clinical models then the 2 > can evolve in their own way. We have done several trial implementations of > Virtual Medical Record Models (vMR) which used V3 datatypes and RIM like > classes and could build those models from V2 messages, or in some cases non > standard Web Services, although for specific clinical classes did use ISO > 13606 archetypes to structure the data in V2 messages. > > I think the dream of having direct model serializations as messages is > flawed for all the reasons that have made V3 impossible to implement in the > wider world. While the tack it on the end, lots of optionality rationale > might seem clunky, maybe its the best solution to a difficult problem. If we > define tight SOAP web services for everything we will end up with thousands > of slightly different SOAP calls for every minor variation and I am not sure > this is the path to enlightenment either. > > I am looking a Grahams proposal now, but I do wonder if the start again > from scratch mentality is not part of the problem. Perhaps that is a lesson > to be learned from the V3 process. Maybe the problem is 2 complex to solve > from scratch and like nature we have to evolve and accept there is lots of > junk DNA, but maintaining a working standard at all times is the only way to > avoid extinction. > > I do like the idea of a cohesive model for use in decision support, and > that's what the vMR/GELLO is about, but I doubt there will ever be a one > size fits all model and any model will need to evolve. Disconnecting the > model from the messaging, with all the pain that involves, might create a > layered approach that might allow the HL7 organism to evolve gracefully. I > do think part of the fresh look should be education on what V2 actually > offers, and can offer, and I suspect many people in HL7 have never seriously > looked at it in any depth. > > Andrew McIntyre**** > > > > Saturday, August 20, 2011, 4:37:37 AM, you wrote:**** > > Hi Grahame, > > Going to throw some things into the mix from our previous discussions > because I don't see them addressed yet. (Though I admit I haven't reread > the whole thing, so if you've addressed and I haven't seen, just point me at > the proper location.) > > One of the challenges that has bogged down much of the v3 work at the > international level (and which causes a great deal of pain at the > project/implementation level) is the issue of refactoring. The pain at the > UV level comes from the fact that we have a real/perceived obligation to > meet all known and conceivable use-cases for a particular domain. For > example, the pharmacy domain model needs to meet the needs of clinics, > hospitals, veterinarians, and chemotherapy protocols and must support the > needs of the U.S., Soviet union and Botswana. To make matters more > interesting, participation from the USSR and Botswana is a tad light. > However the fear is that if all of these needs aren't taken into account, > then when someone with those needs shows up at the door, the model will need > to undergo substantive change, and that will break all of the existing > systems. > > The result is a great deal of time spent gathering requirements and > refactoring and re-refactoring the model as part of the design process, > together with a tendency to make most, if not all data elements optional at > the UV level. A corollary is that the UV specs are totally unimplementable > in an interoperable fashion. The evil of optionality that manifested in v2 > that v3 was going to banish turned out to not be an issue of the standard, > but rather of the issues with creating a generic specification that > satisfies global needs and a variety of use-cases. > > The problem at the implementer/project level is that when you take the UV > model and tightly constrain it to fit your exact requirements, you discover > 6 months down the road that one or more of your constraints was wrong and > you need to loosen it, or you have a new requirement that wasn't thought of, > and this too requires refactoring and often results in wire-level > incompatibilities. > > One of the things that needs to be addressed if we're really going to > eliminate one of the major issues with v3 is a way to reduce the fear of > refactoring. Specifically, it should be possible to totally refactor the > model and have implementations and designs work seemlessly across versions. > > I think putting OWL under the covers should allows for this. If we can > assert equivalencies between data elements in old and new models, or even > just map the wire syntaxes of old versions to new versions of the definition > models, then this issue would be significantly addressed: > - Committees wouldn't have to worry about satisfying absolutely every > use-case to get something useful out because they know they can make changes > later without breaking everything. (They wouldn't even necessarily have to > meet all the use-cases of the people in the room! :>) > - Realms and other implementers would be able to have an interoperability > path that allowed old wire formats to interoperate with new wireformats > through the aid of appropriate tooling that could leverage the OWL under the > covers. (I think creating such tooling is *really* important because > version management is a significant issue with v3. And with XML and > schemas, the whole "ignore everything on the end you don't recognize" from > v2 isn't a terribly reasonable way forward. > > I think it's important to figure out exactly how refactoring and version > management will work in this new approach. The currently proposed approach > of "you can add stuff, but you can't change what's there" only scales so > far. > > > I think we *will* need to significantly increase the number of Resources > (from 30 odd to a couple of hundred). V3 supports things like invoices, > clinical study design, outbreak tracking and a whole bunch of other > healthcare-related topics that may not be primary-care centric but are still > healthcare centric. That doesn't mean all (or even most) systems will need > to deal with them, but the systems that care will definitely need them. The > good news is that most of these more esoteric areas have responsible > committees that can manage the definition of these resources, and as you > mention, we can leverage the RMIMs and DMIMs we already have in defining > these structures. > > > The specification talks about robust capturing of requirements and > traceability to them, but gives no insight into how this will occur. It's > something we've done a lousy job of with v3, but part of the reason for that > is it's not exactly an easy thing to do. The solution needs to flesh out > exactly how this will happen. > > > We need a mapping that explains exactly what's changed in the datatypes > (and for stuff that's been removed, how to handle that use-case). > > There could still be a challenge around granularity of text. As I > understand it, you can have a text representation for an attribute, or for > any XML element. However, what happens if you have a text blob in your > interface that covers 3 of 7 attributes inside a given XML element. You > can't use the text property of the element, because the text only covers 3 > of 7. You can't use the text property of one of the attributes because it > covers 3 separate attributes. You could put the same text in each of the 3 > attributes, but that's somewhat redundant and is going to result in > rendering issues. One solution might be to allow the text specified at the > element level to identify which of the attributes the text covers. A > rendering system could then use that text for those attributes, and then > render the discrete values of the remaining specified attributes. What this > would mean is that an attribute might be marked as "text" but not have text > content directly if the parent element had a text blob that covered that > attribute. > > > > New (to Grahame) comments: > > I didn't see anything in the HTML section or the transaction section on how > collisions are managed for updates. A simple requirement (possibly > optional) to include the version id of the resource being updated or deleted > should work. > > To my knowledge, v3 (and possibly v2) has never supported true "deletes". > At best, we do an update and change the status to nullified. Is that the > intention of the "Delete" transaction, or do we really mean a true "Delete"? > Do we have any use-cases for true deletes? > > I wasn't totally clear on the context for uniqueness of ids. Is it within > a given resource or within a given base URL? What is the mechanism for > referencing resources from other base URLs? (We're likely to have networks > of systems that play together.) > > Nitpick: I think "id" might better be named "resourceId" to avoid any > possible confusion with "identifier". I recognize that from a coding > perspective, shorter is better. However, I think that's outweightd by the > importance of avoiding confusion. > > In the resource definitions, you repeated definitions for resources > inherited from parent resources. E.g. Person.created inherited from > Resource.Base.created. Why? That's a lot of extra maintenance and > potential for inconsistency. It also adds unnecessary volume. > > Suggest adding a caveat to the draft that the definitions are placeholders > and will need significant work. (Many are tautological and none meet the > Vocab WG's guidelines for quality definitions.) > > Why is Person.identifier mandatory? > > You've copied "an element from Resource.Base.???" to all of the Person > attributes, including those that don't come from Resource.Base. > > Obviously the workflow piece and the conformance rules that go along with > it need some fleshing out. (Looks like this may be as much fun in v4 as it > has been in v3 :>) > > The list of identifier types makes me queasy. It looks like we're > reintroducing the mess that was in v2. Why? Trying to maintain an ontology > of identifier types is a lost cause. There will be a wide range of > granularity requirements and at fine granularity, there will be 10s of > thousands. The starter list is pretty incoherent. If you're going to have > types at all, the vocabulary should be constrained to a set of codes based > on the context in which the real-world identifier is present. If there's no > vocabulary defined for the property in that context, then you can use text > for a label and that's it. > > I didn't see anything on conformance around datatypes. Are we going to > have datatype flavors? How is conformance stated for datatype properties? > > I didn't see templateId or flavorId or any equivalent. How do instances > (or portions there-of) declare conformance to "additional" constraint > specifications/conformance profiles than the base one for that particular > server? > > We need to beef up the RIM mapping portion considerably. Mapping to a > single RIM class or attribute isn't sufficient. Most of the time, we're > going to need to map to a full context model that talks about the > classCodes, moodCodes and relationships. Also, you need to relate > attributes to the context of the RIM location of your parent. > > There's no talk about context conduction, which from an implementation > perspective is a good thing. However, I think it's still needed behind the > scenes. Presumably this would be covered as part of the RIM semantics > layer? > > In terms of the "validate" transaction, we do a pseudo-validate in > pharmacy, but a 200 response isn't sufficient. We can submit a draft > prescription and say "is this ok?". The response might be as simple as > "yes" (i.e. a 200). However, it could also be a "no" or "maybe" with a list > of possible contraindications, dosage issues, allergy alerts and other > detected issues. How would such a use-case be met in this paradigm? > > At the risk of over-complicating things, it might be useful to think about > data properties as being identifying or not to aid in exposing resources in > a de-identified way. (Not critical, just wanted to plant the seed in your > head about if or how this might be done.) > > > All questions and comments aside, I definitely in favour of fleshing out > this approach and looking seriously at moving to it. To that end, I think > we need a few things: > - A list of the open issues that need to be resolved in the new approach. > (You have "todo"s scattered throughout. A consolidated list of the "big" > things would be useful.) > - An analysis of how we move from existing v3 to the new approach, both in > terms of leveraging existing artifacts and providing a migration path for > existing solutions as well as what tools, etc. we need. > - A plan for how to engage the broader community for review. (Should > ideally do this earlier rather than later.) > > Thanks to you, Rene and others for all the work you've done. > > > Lloyd > > -------------------------------------- > Lloyd McKenzie > > +1-780-993-9501 > > > > Note: Unless explicitly stated otherwise, the opinions and positions > expressed in this e-mail do not necessarily reflect those of my clients nor > those of the organizations with whom I hold governance positions. > > > On Fri, Aug 19, 2011 at 9:08 AM, Grahame Grieve <grahame@kestral.com.au*** > * > > > wrote:**** > > > hi All > > Responses to comments > > #Michael > > > 1. I would expect more functional interface to use these resources. > > as you noted in later, this is there, but I definitely needed to make > more of it. That's where I ran out of steam > > > 2. One of the things that was mentioned (e.g. at the Orlando > > WGM RIMBAA Fresh Look discussion) is that we want to use > > industry standard tooling, right? Are there enough libraries that > > implement REST? > > this doesn't need tooling. There's schemas if you want to bind to them > > > 2b. A lot of vendors now implement WebServices. I think we should > > go for something vendors already have or will easilly adopt. Is that the > case with REST? > > Speaking as a vendor/programmer/writer of an open source web services > toolkit, I prefer REST. Way prefer REST > > > Keep up the good work! > > ta > > #Mark > > > I very much like the direction of this discussion towards web services > > and in particular RESTful web services. > > yes, though note that REST is a place to start, not a place to finish. > > > At MITRE we have been advocating this approach for some time with our > hData initiative. > > yes. you'll note my to do: how does this relate to hData, which is a > higher level > specification than the CRUD stuff here. > > #Eliot > > > Hats off - I think it's an excellent piece of work and definitely a step > in right direction. > > thanks. > > > I didn't know other people in the HL7 world other than me were talking > about > > (highrise). Who are they? > > not in Hl7. you were one. it came up in some other purely IT places that I > play > > > 5) Build it up by hand with a wiki - it is more scalable really since > you > > wiki's have their problems, though I'm not against them. > > > 1) I think it would be better not to use inheritance to define a patient > as > > a sub type of a person. The trouble with that approach is that people > can > > On the wire, a patient is not a sub type of person. The relationship > between the two is defined in the definitions. > > > A simpler approach is associate additional data with a person if and when > > they become a patient. > > in one way, this is exactly what RFH does. On the other hand, it creates a > new identity for the notion of patient (for integrity). We can discuss > whether that's good or bad. > > > 2) I'd avoid language that speaks down to 'implementers'. It's > enterprise > > really? Because I'm one. down the bottom of your enterprise pole. And > I'm happy to be one of those stinking implementers down in the mud. > I wrote it first for me. But obviously we wouldn't want to cause offense. > I'm sure I haven't caused any of that this week ;-) > > > 3) If you want to reach a broader audience, then simplify the language. > > argh, and I thought I had. how can we not use the right terms? But I > agree that the introduction is not yet direct enough - and that's after > 4 rewrites to try and make it so.... > > Grahame > > > ************************************************ > To access the Archives of this or other lists or change your list settings > and information, go to: **** > > http://www.hl7.org/listservice**** > > > > ************************************************ > To access the Archives of this or other lists or change your list settings > and information, go to: http://www.hl7.org/listservice**** > > > > > > *-- > Best regards, > Andrew *mailto:andrew@Medical-Objects.com.au<andrew@Medical-Objects.com.au> > > *sent from a real computer***** > > **** > > **** > > **************************************************** > > To access the Archives of this or other lists or change your list settings and information, go to: http://www.hl7.org/listservice**** > > > > **** > > **** > > -- > Jim McCusker > Programmer Analyst > Krauthammer Lab, Pathology Informatics > Yale School of Medicine > james.mccusker@yale.edu | (203) 785-6330 > http://krauthammerlab.med.yale.edu > > PhD Student > Tetherless World Constellation > Rensselaer Polytechnic Institute > mccusj@cs.rpi.edu > http://tw.rpi.edu**** > > **** > > > > **** > > **** > > -- > Jim McCusker > Programmer Analyst > Krauthammer Lab, Pathology Informatics > Yale School of Medicine > james.mccusker@yale.edu | (203) 785-6330 > http://krauthammerlab.med.yale.edu > > PhD Student > Tetherless World Constellation > Rensselaer Polytechnic Institute > mccusj@cs.rpi.edu > http://tw.rpi.edu**** > > > > **** > > ** ** > > -- > Jim McCusker > Programmer Analyst > Krauthammer Lab, Pathology Informatics > Yale School of Medicine > james.mccusker@yale.edu | (203) 785-6330 > http://krauthammerlab.med.yale.edu > > PhD Student > Tetherless World Constellation > Rensselaer Polytechnic Institute > mccusj@cs.rpi.edu > http://tw.rpi.edu**** >
Received on Sunday, 18 September 2011 03:07:57 UTC