- From: M. Scott Marshall <mscottmarshall@gmail.com>
- Date: Mon, 28 Feb 2011 13:21:20 +0100
- To: HCLS <public-semweb-lifesci@w3.org>
Slides for James Malone's talk are available on the web page:
http://www.w3.org/wiki/HCLSIG_BioRDF_Subgroup/Meetings/2011/02-28_Conference_Call
Date of Call: Monday, February 28, 2011
Time of Call: 11:00 am Eastern Time, 4 pm UK, 5 pm CET
Dial-In #: +1.617.761.6200 (Cambridge, MA)
[Note: extremely limited access to European dial in numbers below]
Dial-In #: +33.4.26.46.79.03 (Nice, France)
Dial-In #: +44.203.318.0479 (Bristol, UK)
Participant Access Code: 4257 ("HCLS")
IRC Channel: irc.w3.org port 6665 channel #HCLS (see W3C IRC page for
details, or see Web IRC), Quick Start: Use
http://www.mibbit.com/chat/?server=irc.w3.org:6665&channel=%23hcls for
IRC access.
Duration: ~1 hour
Convener: M. Scott Marshall
Scribe: TBD
[edit]Agenda
Introductions
Presentation: RDFizing the EBI Gene Expression Atlas - James Malone
Summary: The Gene Expression Atlas at EBI allows querying across
genes, organisms and conditions in which they are differentially
expressed. The results from such queries are ranked and curated
annotations such as p values, sample information and experimental
protocol information are also available. I will report on the work we
have been doing to RDFize this data using the publicly available web
services alongside the EBI's application ontology, EFO, which
describes experimental variables using numerous community reference
ontologies.
Datasets to request from ArrayExpress? - All
Microarray RDF, Getting started on the W3C note - All
AOB
--
M. Scott Marshall, W3C HCLS IG co-chair, http://www.w3.org/blog/hcls
http://staff.science.uva.nl/~marshall
Received on Monday, 28 February 2011 12:46:54 UTC