- From: M. Scott Marshall <mscottmarshall@gmail.com>
- Date: Mon, 8 Nov 2010 13:28:37 +0100
- To: HCLS <public-semweb-lifesci@w3.org>
- Cc: Rebholz <rebholz@ebi.ac.uk>, Christoph Grabmueller <grabmuel@ebi.ac.uk>
This is a reminder that the next BioRDF telcon call will be held at 11AM EDT (4PM UK, 5PM CET) on Monday, Nov. 8 (see details below). Dietrich Rebholz and Christoph Grabmuller of the Rebholz Group at EBI will be present to talk to us about RDF representations of microarray studies, and more. http://esw.w3.org/HCLSIG_BioRDF_Subgroup/Meetings/2010/11-08_Conference_Call Dietrich Rebholz (EBI) will present about the Pistoia SESL project. This should serve as background for discussion about representing microarray results in RDF and what we might ask from microarray services that eventually provide direct access to RDF data from, for example, ArrayExpress. Title: Interoperability of resources in the SESL pilot Abstract: Literature resources form an important pylon in the data infrsturcture of biomedical data resources, since the scientific literature enables to bridge across the different biomedical and chemical domains. As part of the SESL pilot project the Rebholz group have integrated content from UniProtKb, ArrayExpress (GeneAtlas) and the scientific literature from different publishers into a triple store. The triple strore supports retrieval of evidence on gene-to-disease relations for Type II diabetes. The integration of ArrayExpress is ongoing work. Furthermore, the partners in the SESL pilot project are exploring the definition of common standards to include contributions from different sites in the framework of a brokering service. Cheers, Scott == Conference Details == * Date of Call: Monday, November 8, 2010 * Time of Call: 11:00 am Eastern Time (4pm UK, 5 pm CET) * Dial-In #: +1.617.761.6200 (Cambridge, MA) * Dial-In #: +33.4.26.46.79.03 (Nice, France) * Dial-In #: +44.203.318.0479 (Bristol, UK) * Participant Access Code: 4257 ("HCLS") * IRC Channel: irc.w3.org port 6665 channel #HCLS (see W3C IRC page for details, or see Web IRC), Quick Start: Use http://www.mibbit.com/chat/?server=irc.w3.org:6665&channel=%23hcls for IRC access. * Duration: ~1 hour * Convener: M. Scott Marshall * Scribe: to-be-determined ==Agenda== * Interoperability of resources in the SESL pilot - Dietrich Rebholz * Questions and Discussion toward harmonization of practices - All -- M. Scott Marshall, W3C HCLS IG co-chair, http://www.w3.org/blog/hcls Leiden University Medical Center / University of Amsterdam http://staff.science.uva.nl/~marshall
Received on Monday, 8 November 2010 12:29:15 UTC