Re: Report ready to publish - PDDI Min Info Model

On 5/17/19 2:09 PM, Eric Prud'hommeaux wrote:
> On Fri, May 17, 2019 at 12:48:00PM +0200, Michel Dumontier wrote:
>> Great - then we just need Eric to copy the file to the w3c server, and then
>> you can also update the w3id URL
> I believe the chair has to be the one to (export from respect and) upload the doc using the web interface for the community group page. (I've never seen it in action 'cause I'm not a chair.) Spot-checking the respoc output against <https://nam05.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.w3.org%2Fcommunity%2Freports%2Freqs%2F&amp;data=02%7C01%7Crdb20%40pitt.edu%7C9d7992de854b4b4d04a008d6daf2c5f8%7C9ef9f489e0a04eeb87cc3a526112fd0d%7C1%7C0%7C636937133573984985&amp;sdata=%2Bh14ZOuKY1GpQA3l6rYCo6e0U7tDrIxnKoNjYAjn%2Fcs%3D&amp;reserved=0>, I think respec is doing the right thing.
>
> I submitted a PR which takes care of a bunch of encoding issues, fixes up the sections to match what I think was intended, and indents the JSON examples nicely. I wanted to compare these side-by-side:

Thank you Eric. I did not realize that the last version I pushed screwed 
up the TOC numbering so bad. Glad you were able to fix it and thank you 
for your time doing it. I found a couple of very minor issues (e.,g 
stray character) and fixed it. Now pushed to git hub and viewable at 
https://w3id.org/hclscg/pddi


Michel, I exported the HTML from the link above using ResPec and 
attached in case it works...




> before: https://nam05.safelinks.protection.outlook.com/?url=https%3A%2F%2Fericprud.github.io%2Fhcls-drug-drug-interaction%2F&amp;data=02%7C01%7Crdb20%40pitt.edu%7C9d7992de854b4b4d04a008d6daf2c5f8%7C9ef9f489e0a04eeb87cc3a526112fd0d%7C1%7C0%7C636937133573984985&amp;sdata=MMAlGqT9ZbL1lTKVKuLPyOP8vqlRulgmOx1qqVK%2F6EY%3D&amp;reserved=0

> after:  https://dbmi-icode-01.dbmi.pitt.edu/dikb-evidence/hcls-drug-drug-interaction/index.html

>
> but in my haste, but the click act that I expected to merge into ericprud/hcls-drug-drug-interaction apparently merged into w3c/hcls-drug-drug-interaction instead. Anyways, please take a look and see if I made the correct assumptions. Also, maybe github.io will come back to life in a bit and enable side-by-side comparison in a browswer.
>
>
>> m.
>>
>> On Fri, May 17, 2019 at 11:50 AM Boyce, Richard David <rdb20@pitt.edu>
>> wrote:
>>
>>> Michel and Eric, The final document is ready now. I changed the report
>>> status to CG-FINAL and pushed to github. Please let me know if there is
>>> anything else that I need to do. thank you, -R
>>>
>>> On 5/17/19 5:41 AM, Michel Dumontier wrote:
>>>
>>> Dear Rich,
>>>   Great news!  I've published the draft report on the homepage
>>> https://nam05.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.w3.org%2Fcommunity%2Fhclscg%2F&amp;data=02%7C01%7Crdb20%40pitt.edu%7C9d7992de854b4b4d04a008d6daf2c5f8%7C9ef9f489e0a04eeb87cc3a526112fd0d%7C1%7C0%7C636937133573984985&amp;sdata=PQxA7%2BBFlSXIdbmpLNJrtlCUPkNZbk1bN4ZjvE1rZ2Q%3D&amp;reserved=0

>>> <https://nam05.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.w3.org%2Fcommunity%2Fhclscg%2F&amp;data=02%7C01%7Crdb20%40pitt.edu%7C9d7992de854b4b4d04a008d6daf2c5f8%7C9ef9f489e0a04eeb87cc3a526112fd0d%7C1%7C0%7C636937133573984985&amp;sdata=PQxA7%2BBFlSXIdbmpLNJrtlCUPkNZbk1bN4ZjvE1rZ2Q%3D&amp;reserved=0>
>>>   now to publish the final report, we need to copy the document to the W3C
>>> site and update the URL.  I've been in contact with Eric to do this.
>>> Indicate to us when the final document will be ready.
>>>
>>> m.
>>>
>>>
>>> On Tue, May 14, 2019 at 7:55 PM Boyce, Richard David <rdb20@pitt.edu>
>>> wrote:
>>>
>>>> Michel and David,
>>>>
>>>> I am please to announce that we have addressed all of the comments we
>>>> received from the W3C lists (including yours) and are now ready to publish
>>>> "A Minimum Representation of Potential Drug-Drug Interaction Knowledge and
>>>> Evidence - Technical and User-centered Foundation."
>>>>
>>>> I am waiting for one person to let me know if they want to be listed as
>>>> an author but that is all.  Would it be possible to publish by the end of
>>>> next week?
>>>>
>>>> The note: https://nam05.safelinks.protection.outlook.com/?url=https%3A%2F%2Fw3id.org%2Fhclscg%2Fpddi&amp;data=02%7C01%7Crdb20%40pitt.edu%7C9d7992de854b4b4d04a008d6daf2c5f8%7C9ef9f489e0a04eeb87cc3a526112fd0d%7C1%7C0%7C636937133573984985&amp;sdata=WFVwp2tQ1syHWlbqeyGoZNcoB7ECb%2FEJFteyVDFq%2FwI%3D&amp;reserved=0

>>>> <https://nam05.safelinks.protection.outlook.com/?url=https%3A%2F%2Fw3id.org%2Fhclscg%2Fpddi&amp;data=02%7C01%7Crdb20%40pitt.edu%7C9d7992de854b4b4d04a008d6daf2c5f8%7C9ef9f489e0a04eeb87cc3a526112fd0d%7C1%7C0%7C636937133573984985&amp;sdata=WFVwp2tQ1syHWlbqeyGoZNcoB7ECb%2FEJFteyVDFq%2FwI%3D&amp;reserved=0>
>>>>
>>>> Github: https://nam05.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fw3c%2Fhcls-drug-drug-interaction%2F&amp;data=02%7C01%7Crdb20%40pitt.edu%7C9d7992de854b4b4d04a008d6daf2c5f8%7C9ef9f489e0a04eeb87cc3a526112fd0d%7C1%7C0%7C636937133573984985&amp;sdata=Dpt2A%2Bqn4S9iGoeIFx%2FjnVVkk5Br0uzIpvWjvM6kEIo%3D&amp;reserved=0

>>>> <https://nam05.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fw3c%2Fhcls-drug-drug-interaction%2F&amp;data=02%7C01%7Crdb20%40pitt.edu%7C9d7992de854b4b4d04a008d6daf2c5f8%7C9ef9f489e0a04eeb87cc3a526112fd0d%7C1%7C0%7C636937133573984985&amp;sdata=Dpt2A%2Bqn4S9iGoeIFx%2FjnVVkk5Br0uzIpvWjvM6kEIo%3D&amp;reserved=0>
>>>>
>>>> thank you for the favor of a reply,
>>>>
>>>> -Rich
>>>>
>>>> --
>>>> Richard D Boyce, PhD
>>>> Associate Professor of Biomedical Informatics and Clinical and Translational Science in the Clinical and Translational
>>>> Science Institute
>>>> University of Pittsburghrdb20@pitt.edu
>>>> Office: 412-648-9219
>>>> Twitter: @bhaapgh
>>>>
>>>>
>>> --
>>> Michel Dumontier
>>> Distinguished Professor of Data Science
>>> Maastricht University
>>> https://nam05.safelinks.protection.outlook.com/?url=http%3A%2F%2Fdumontierlab.com&amp;data=02%7C01%7Crdb20%40pitt.edu%7C9d7992de854b4b4d04a008d6daf2c5f8%7C9ef9f489e0a04eeb87cc3a526112fd0d%7C1%7C0%7C636937133573994994&amp;sdata=09vbQ9EVByWeDlvQPIam3KWbS%2BlP4eB4QKzCgXfSqX0%3D&amp;reserved=0

>>> <https://nam05.safelinks.protection.outlook.com/?url=http%3A%2F%2Fdumontierlab.com&amp;data=02%7C01%7Crdb20%40pitt.edu%7C9d7992de854b4b4d04a008d6daf2c5f8%7C9ef9f489e0a04eeb87cc3a526112fd0d%7C1%7C0%7C636937133573994994&amp;sdata=09vbQ9EVByWeDlvQPIam3KWbS%2BlP4eB4QKzCgXfSqX0%3D&amp;reserved=0>
>>>
>>>
>>> --
>>> Richard D Boyce, PhD
>>> Associate Professor of Biomedical Informatics and Clinical and Translational Science in the Clinical and Translational
>>> Science Institute
>>> University of Pittsburghrdb20@pitt.edu
>>> Office: 412-648-9219
>>> Twitter: @bhaapgh
>>>
>>>
>> -- 
>> Michel Dumontier
>> Distinguished Professor of Data Science
>> Maastricht University
>> https://nam05.safelinks.protection.outlook.com/?url=http%3A%2F%2Fdumontierlab.com&amp;data=02%7C01%7Crdb20%40pitt.edu%7C9d7992de854b4b4d04a008d6daf2c5f8%7C9ef9f489e0a04eeb87cc3a526112fd0d%7C1%7C0%7C636937133573994994&amp;sdata=09vbQ9EVByWeDlvQPIam3KWbS%2BlP4eB4QKzCgXfSqX0%3D&amp;reserved=0



-- 
Richard D Boyce, PhD
Associate Professor of Biomedical Informatics and Clinical and Translational Science in the Clinical and Translational
Science Institute
University of Pittsburgh
rdb20@pitt.edu
Office: 412-648-9219
Twitter: @bhaapgh