RE: DSE TC Friday, June 8

FWIW,

Here (attached) is a normalized json merge of demog, ae, and treatments (left out vital signs since I did not know how best to trim the massive file).

I suggest we think next what addding polymorphism or biomarker data (ala rdf then json) might look like-- for example...

     subj_uri  {snp1, snp2, ...}, { {biomarker1, normalized_value1 } , {biomarker2, normalized_value2}...}

     biomarker1, gene_uri (or metabolite_uri), qualification_study_uri ....

If this is a OK first pass, I'll begin doing it!

Eric


-----Original Message-----
From: Dobson, Stephen [mailto:Stephen.Dobson@pfizer.com]
Sent: Thu 6/7/2007 1:39 PM
To: Eric Neumann; public-hcls-dse@w3.org
Subject: RE: DSE TC Friday, June 8
 
Hi All, 

 

I've added some exhibit files (JSON) together with the source data
(.txt) files into the location
http://esw.w3.org/topic/HCLSIG/Drug_Safety_and_Efficacy?action=AttachFil
e&do=get&target=exhibit.zip

 

This is on the DSE main page. 

 

I got a bit carried away with trying to get all the treatment Adverse
and Vitals to appear on the single timeline but didn't quite manage it
and managed to destroy my working view of the data so no HTML file at
the moment. 

 

I have a separate JSON file for each dataset.   They can all appear in a
single html page in any combination just by including separate link tags

 

e.g. 

   <link href="demog.js" type="application/json" rel="exhibit/data" />

   <link href="vitals.js" type="application/json" rel="exhibit/data" />

 

A single page will take all of this data (I've parred it right down to
just 70 or so subjects). 

If you do include all the data in a single page it will take several
minutes to load with warnings about the javascript, though it will do
so. 

 

Enjoy.   I might not get chance to join tomorrow as I'm traveling. 

 

Do we need URI's for at least 

 

A row of data: a variable heading: A data relationships (e.g. indicating
a systolic to diastolic data match). 

 

Cheers

 

Stephen. 

 

________________________________

From: public-hcls-dse-request@w3.org
[mailto:public-hcls-dse-request@w3.org] On Behalf Of Eric Neumann
Sent: Thursday, June 07, 2007 9:15 AM
To: public-hcls-dse@w3.org
Subject: DSE TC Friday, June 8

 

 

SW-HCLS(DSE) Friday, June 8, 8:30am-9:30am/13:30-14:30 UTC 
for a duration of 1 hour
Zakim Bridge +1.617.761.6200 <tel:+1.617.761.6200> , conference code
3731 ("DSE1")
Coordinator: Eric Neumann <eneumann@teranode.com>

Agenda:
a) Roll call, minutes review

b) Propose next DSE call June 22, 2007

c) Planning Preparation for DIA panel June 20

d) Latest SIMILE Exhibit of SDTM data: for now see
http://eneumann.org/exhibit/clinicaldemo/demog_vu.html

e) Summer planning: DSE paper, demo, new charter


cheers,
Eric 

----------------------------------------------------------------------
LEGAL NOTICE
Unless expressly stated otherwise, this message is confidential and may be privileged.  It is intended for the addressee(s) only.  Access to this E-mail by anyone else is unauthorized.  If you are not an addressee, any disclosure or copying of the contents of this E-mail or any action taken (or not taken) in reliance on it is unauthorized and may be unlawful.  If you are not an addressee, please inform the sender immediately.