Re: Question about the eraly deployment at PIPPA

Hi Franck

Cyril and Bert would be best placed to give you answers to your questions but I believe that the simple answer is that the BioChemEntity is some wheat variant which is the subject of a PIPPA study.

I've put one of the PIPPA pages (45) through the JSON-LD playground (links below) as I find that a useful way of visualising the data (see attached screenshot).
https://pippa.psb.ugent.be/pippa_experiments/consult_experiment_basic_info/45

https://tinyurl.com/yd9rguwl


In this example, we have a study linking to its subject which is some BioChemEntity, in this case some wheat variant. We use taxonomicRange to state the taxa that the variant is which we then connect to some species through the parent taxon.

Hopefully that helps

Alasdair

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Alasdair J G Gray
Associate Professor in Computer Science,
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Heriot-Watt University, Edinburgh, UK.

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On 09/03/2021, 17:03, "Franck Michel" <franck.michel@cnrs.fr> wrote:

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    Dear all,

    In a recent call, there was a discussion about PIPPA (PSB Interface for
    Plant Phenotype Analysis https://pippa.psb.ugent.be/) deploying markup
    with Taxon and BioChemEntity.

    I'd like to mention that tomorrow at the TDWG webinar, but I don't know
    anything about phenotyping nor genomics...
    Can someone just give me a quick insight into what BioChemEntity
    represents here, and how they relate to taxa?

    Thx in advance,
        Franck.

    --

    Franck MICHEL, CNRS research engineer
    Université Côte d’Azur, CNRS, Inria
    I3S laboratory (UMR 7271)



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