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Re: Data repository description example for identifiers.org

From: Sarala Wimalaratne <sarala@ebi.ac.uk>
Date: Wed, 14 Jun 2017 12:53:24 +0100
Cc: "Gray, Alasdair J G" <A.J.G.Gray@hw.ac.uk>, public-bioschemas@w3.org
Message-Id: <90BB84F1-3F98-4F4F-BFF8-B4F9B4944770@ebi.ac.uk>
To: "J. Clark-Casey" <jc955@cam.ac.uk>
Hi Justin,

Thanks for your comments. I’ve just fixed my example following your advice.

Cheers,
Sarala

> On 14 Jun 2017, at 11:55, J. Clark-Casey <jc955@cam.ac.uk> wrote:
> 
> Hi Sarala.  I took a quick look and a couple of comments
> 
> * Both the Date and DateTime types used in CreativeWork.dateModified are described as requiring an ISO 8601 format.  '2017-06-06' rather than 'June 6, 2017'
> 
> * CreativeWork.keywords [1] says multiple entries in a list are comma separated ("registry, life science") but I'm sure having them in a JSON array is fine as well.  I expect any competent parser would check both possibilities but perhaps it would be nice to clarify this in schema.org <http://schema.org/> itself (if Dan is listening).
> 
> [1] http://schema.org/keywords <http://schema.org/keywords>
> 
> -- Justin
> 
> On 2017-06-14 10:26, Sarala Wimalaratne wrote:
>> Hi Alasdair,
>> Please find the identifiers.org <http://identifiers.org/> [5] example at
>> https://github.com/BioSchemas/DataRepositories/tree/master/examples <https://github.com/BioSchemas/DataRepositories/tree/master/examples>
>> [6]
>> I’ve also pushed this to production on identifiers.org <http://identifiers.org/> [5]. Note
>> that I have not included the following for now -
>> date modified - I need to do a bit more work to get this information
>> accessURL - not in schema.org <http://schema.org/> [7]
>> identifierPattern - not in schema.org <http://schema.org/> [7]
>> example identifier - not in schema.org <http://schema.org/> [7]
>> Cheers,
>> Sarala
>>> On 13 Jun 2017, at 11:50, Gray, Alasdair J G <A.J.G.Gray@hw.ac.uk <mailto:A.J.G.Gray@hw.ac.uk>>
>>> wrote:
>>> Hi Sarala,
>>> Would it be possible to move this example in the newly created
>>> DataRepositories GitHub repository?
>>> Could you place it in an examples folder?
>>> Thanks
>>> Alasdair
>>>> On 7 Jun 2017, at 12:47, Sarala Wimalaratne <sarala@ebi.ac.uk <mailto:sarala@ebi.ac.uk>>
>>>> wrote:
>>>> Hi All,
>>>> We have put together a data repository description example for
>>>> identifiers.org <http://identifiers.org/> [1] at
>> https://docs.google.com/document/d/14as5lQFOASY8rqcAQf2HoHTh0n22Lq4NeOMOSOLlBik/edit <https://docs.google.com/document/d/14as5lQFOASY8rqcAQf2HoHTh0n22Lq4NeOMOSOLlBik/edit>
>>>> [2].
>>>> It would be good to hear your thoughts.
>>>> Regards,
>>>> Sarala M Wimalaratne, B.Eng. PhD
>>>> Senior Software Engineer
>>>> European Bioinformatics Institute (EMBL-EBI)
>>>> European Molecular Biology Laboratory
>>>> Wellcome Trust Genome Campus
>>>> Hinxton
>>>> Cambridge CB10 1SD UK
>>> Alasdair J G Gray
>>> Fellow of the Higher Education Academy
>>> Assistant Professor in Computer Science,
>>> School of Mathematical and Computer Sciences
>>> (Athena SWAN Bronze Award)
>>> Heriot-Watt University, Edinburgh UK.
>>> Email: A.J.G.Gray@hw.ac.uk <mailto:A.J.G.Gray@hw.ac.uk>
>>> Web: http://www.macs.hw.ac.uk/~ajg33 <http://www.macs.hw.ac.uk/~ajg33> [3]
>>> ORCID: http://orcid.org/0000-0002-5711-4872 <http://orcid.org/0000-0002-5711-4872> [4]
>>> Office: Earl Mountbatten Building 1.39
>>> Twitter: @gray_alasdair
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>> Links:
>> ------
>> [1] http://identifiers.org/ <http://identifiers.org/>
>> [2]
>> https://docs.google.com/document/d/14as5lQFOASY8rqcAQf2HoHTh0n22Lq4NeOMOSOLlBik/edit <https://docs.google.com/document/d/14as5lQFOASY8rqcAQf2HoHTh0n22Lq4NeOMOSOLlBik/edit>
>> [3] http://www.macs.hw.ac.uk/~ajg33 <http://www.macs.hw.ac.uk/~ajg33>
>> [4] http://orcid.org/0000-0002-5711-4872 <http://orcid.org/0000-0002-5711-4872>
>> [5] http://identifiers.org <http://identifiers.org/>
>> [6] https://github.com/BioSchemas/DataRepositories/tree/master/examples <https://github.com/BioSchemas/DataRepositories/tree/master/examples>
>> [7] http://schema.org <http://schema.org/>

Received on Wednesday, 14 June 2017 11:52:32 UTC

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