- From: Leyla Garcia <ljgarcia@ebi.ac.uk>
- Date: Wed, 26 Jul 2017 11:26:35 +0100
- To: Michel Dumontier <michel.dumontier@gmail.com>, "Gray, Alasdair J G" <A.J.G.Gray@hw.ac.uk>
- Cc: Carole Goble <carole.goble@manchester.ac.uk>, "public-bioschemas@w3.org" <public-bioschemas@w3.org>
- Message-ID: <7ee05878-181a-1d5f-cbe8-4c9ee72f3e6b@ebi.ac.uk>
Hi all, We had some comments/discussion going on on the spredasheet that have now been moved to the specification document. If you want to participate, please use the specification document (https://docs.google.com/document/d/1XASuESIHU3bi1aXMxQS5-rCOQX0ugjMNkh68VF4co4Q) I will meet with Michel during the second week of September to finalize the specification for the Biological Entity. If you want to participate in the discussion, please let us know so we can set up the right channel. Regards, On 26/07/2017 10:34, Michel Dumontier wrote: > great thanks > i've added comments to the spec > https://docs.google.com/document/d/1XASuESIHU3bi1aXMxQS5-rCOQX0ugjMNkh68VF4co4Q/edit?ts=59785c55# > > will discuss with Leyla and. I'll see Leyla at the biohackathon in > Sept, and am planning to come to the october bioschemas meeting > > m. > > On Wed, Jul 26, 2017 at 9:21 AM, Gray, Alasdair J G > <A.J.G.Gray@hw.ac.uk <mailto:A.J.G.Gray@hw.ac.uk>> wrote: > > You can find links to the specs and also the github tracker for > each group on the bioschemas website. > http://bioschemas.org/groups/ > > Alasdair J G Gray > Fellow of the Higher Education Academy > Assistant Professor in Computer Science > Herriot-Watt University, Edinburgh > > www.macs.hw.ac.uk/~ajg33 <http://%3Cbr/%3Ewww.macs.hw.ac.uk/%7Eajg33> > > ------------------------------------------------------------------------ > *From:* Carole Goble <carole.goble@manchester.ac.uk > <mailto:carole.goble@manchester.ac.uk>> > *Sent:* Tuesday, July 25, 2017 9:09:15 PM > *To:* Michel Dumontier > *Cc:* Gray, Alasdair J G; public-bioschemas@w3.org > <mailto:public-bioschemas@w3.org> > *Subject:* Re: Dissemination of Bioschemas specifications > > > > 1. I stand corrected - Norman had some lovely slides on the marine > use case > 2. Michel - the specs are still in the googledocs so you can > comment right there > > Carole > >> Hi all, >> I had a chance to chat with Leyla at her poster today. I shared >> with her some feedback. Just wondering if there is a particular >> communications channel i should use for written feedback? >> >> m. >> >> On Tue, Jul 25, 2017 at 9:02 PM, Carole Goble >> <carole.goble@manchester.ac.uk >> <mailto:carole.goble@manchester.ac.uk>> wrote: >> >> They are my slides mainly - it was the spoken narrative >> Carole >> >> Sent from my iPhone by >> Professor Carole Goble >> The University of Manchester >> UK >> >> On 25 Jul 2017, at 15:32, "Gray, Alasdair J G" >> <A.J.G.Gray@hw.ac.uk <mailto:A.J.G.Gray@hw.ac.uk>> wrote: >> >>> Are Norman’s slides available? >>> >>> Alasdair >>> >>>> On 25 Jul 2017, at 14:46, Carole Goble >>>> <carole.goble@manchester.ac.uk >>>> <mailto:carole.goble@manchester.ac.uk>> wrote: >>>> >>>> The bioschemas talk and poster at BOSC also attracted a >>>> great deal of interest as did the bioschema part in elixir >>>> interoperability talk in the elixir session at ismb. Norman >>>> did a really great job of putting the reasons and benefits >>>> in terms that were immediately understandable and not about >>>> the technology but the benefit. >>>> >>>> I'm giving a keynote at SWAT4LS - I'm going to be talking >>>> about elixir work - notably CWL, research objects and >>>> bioschemas. >>>> >>>> Carole >>>> >>>> Sent from my iPhone by >>>> Professor Carole Goble >>>> The University of Manchester >>>> UK >>>> >>>> On 25 Jul 2017, at 15:31, "Gray, Alasdair J G" >>>> <A.J.G.Gray@hw.ac.uk <mailto:A.J.G.Gray@hw.ac.uk>> wrote: >>>> >>>>> Hi Leyla, >>>>> >>>>> Thanks for all your efforts in publicising the Bioschemas >>>>> work. I hope that your poster presentation went well at ISMB. >>>>> >>>>> I agree that we should consider putting something together >>>>> for SWAT4LS. We also need to consider what other >>>>> publications we are aiming to write about this work. >>>>> >>>>> Best regards, >>>>> >>>>> Alasdair >>>>> >>>>>> On 27 Jun 2017, at 09:43, Leyla Garcia >>>>>> <ljgarcia@ebi.ac.uk <mailto:ljgarcia@ebi.ac.uk>> wrote: >>>>>> >>>>>> Hi all, >>>>>> >>>>>> We will have a poster at Bio-ontologies (ISMB) this year. >>>>>> It was meant to be about the protein case but now that we >>>>>> have BiologicalEntity as an umbrella it will probably >>>>>> cover much more than just proteins. ISMB is scheduled for >>>>>> the 4th weekend of July so I will share with you all the >>>>>> poster a couple of weeks before that. I hope we will >>>>>> gather some feedback about our proposal. >>>>>> >>>>>> We will also participate in the Biohackathon this year, >>>>>> second week of September. As it happens right before our >>>>>> next meeting, I plan to go ahead with some of the >>>>>> implementation work. In particular, I will work on a >>>>>> javascript module to gather protein related information. >>>>>> I will do my best to make it as generic as possible so it >>>>>> can be modified in order to work for other entities. If >>>>>> by that time there is already a validation tool or any >>>>>> other supporting Bioschemas specifications, it would be >>>>>> wonderful to get some more information before hands. >>>>>> >>>>>> And, SWAT4HCLS call for papers has been recently >>>>>> announced >>>>>> (http://swat4ls.blogspot.co.uk/2017/06/swat4ls-2017-cfp-is-out.html >>>>>> <http://swat4ls.blogspot.co.uk/2017/06/swat4ls-2017-cfp-is-out.html>). >>>>>> We should submit either a poster or a paper there as >>>>>> well. Deadline for paper abstract is 22.Sep with full >>>>>> submission on 06.Oct. >>>>>> >>>>>> Regards, >>>>>> >>>>> >>>>> Alasdair J G Gray >>>>> Fellow of the Higher Education Academy >>>>> Assistant Professor in Computer Science, >>>>> School of Mathematical and Computer Sciences >>>>> (Athena SWAN Bronze Award) >>>>> Heriot-Watt University, Edinburgh UK. >>>>> >>>>> Email: A.J.G.Gray@hw.ac.uk <mailto:A.J.G.Gray@hw.ac.uk> >>>>> Web: http://www.macs.hw.ac.uk/~ajg33 >>>>> <http://www.macs.hw.ac.uk/%7Eajg33> >>>>> ORCID: http://orcid.org/0000-0002-5711-4872 >>>>> <http://orcid.org/0000-0002-5711-4872> >>>>> Office: Earl Mountbatten Building 1.39 >>>>> Twitter: @gray_alasdair >>>>> >>> >>> Alasdair J G Gray >>> Fellow of the Higher Education Academy >>> Assistant Professor in Computer Science, >>> School of Mathematical and Computer Sciences >>> (Athena SWAN Bronze Award) >>> Heriot-Watt University, Edinburgh UK. >>> >>> Email: A.J.G.Gray@hw.ac.uk <mailto:A.J.G.Gray@hw.ac.uk> >>> Web: http://www.macs.hw.ac.uk/~ajg33 >>> <http://www.macs.hw.ac.uk/%7Eajg33> >>> ORCID: http://orcid.org/0000-0002-5711-4872 >>> <http://orcid.org/0000-0002-5711-4872> >>> Office: Earl Mountbatten Building 1.39 >>> Twitter: @gray_alasdair >>> >> >> >> >> -- >> Michel Dumontier >> Distinguished Professor of Data Science >> Maastricht University >> http://dumontierlab.com > > -- > Professor Carole Goble CBE FREng FBCS CITP > School of Computer Science > University of Manchester > Manchester, UK > > tel:+44 161 275 6195 <tel:+44%20161%20275%206195> > email:carole.goble@manchester.ac.uk <mailto:carole.goble@manchester.ac.uk> > twitter: @CaroleAnneGoble > > email etiquette: > I get a lot of email and when I travel it gets even more backed up. > > - Don't get too upset if my replies are short (seehttp://www.phdcomics.com/comics/archive.php?comicid=1047 > <http://www.phdcomics.com/comics/archive.php?comicid=1047>) > - If you don't get a reply within 48 hours there is a good chance the email has scrolled into the distance. If its urgent try again or emailmelanie.price@manchester.ac.uk <mailto:melanie.price@manchester.ac.uk>. > If you haven't heard within a week you really should try again. > > ------------------------------------------------------------------------ > > Founded in 1821, Heriot-Watt is a leader in ideas and solutions. > With campuses and students across the entire globe we span the > world, delivering innovation and educational excellence in > business, engineering, design and the physical, social and life > sciences. > > This email is generated from the Heriot-Watt University Group, > which includes: > > 1. Heriot-Watt University, a Scottish charity registered under > number SC000278 > 2. Edinburgh Business School a Charity Registered in Scotland, > SC026900. Edinburgh Business School is a company limited by > guarantee, registered in Scotland with registered number > SC173556 and registered office at Heriot-Watt University > Finance Office, Riccarton, Currie, Midlothian, EH14 4AS > 3. Heriot- Watt Services Limited (Oriam), Scotland's national > performance centre for sport. Heriot-Watt Services Limited is > a private limited company registered is Scotland with > registered number SC271030 and registered office at Research & > Enterprise Services Heriot-Watt University, Riccarton, > Edinburgh, EH14 4AS. > > The contents (including any attachments) are confidential. If you > are not the intended recipient of this e-mail, any disclosure, > copying, distribution or use of its contents is strictly > prohibited, and you should please notify the sender immediately > and then delete it (including any attachments) from your system. > > > > > -- > Michel Dumontier > Distinguished Professor of Data Science > Maastricht University > http://dumontierlab.com
Received on Wednesday, 26 July 2017 10:27:03 UTC