Re: biontology.org Linked Data URIs?

On 5/28/13 5:04 PM, Richard Boyce wrote:
> I think this helps bioportal keep track of usage (to justify its 
> existence) and reduce annoying bots. Also, I get updates from 
> bioportal for having registered an account. -R

Bots are annoying, but they are part of the ecosystem.
API keys are archaic and quite contradictory an RDF based Linked Data 
realm.

RDF is about structured data enhanced with entity relationship 
semantics. If one actually looks to dog-food RDF you end up with 
solution to this broadly exposed problem. All that's required here is 
the construct RDF based data access policies that are driven by entity 
relationship semantics.

Links:

1. http://www.w3.org/wiki/WebAccessControl -- Web Access Controls
2. http://bit.ly/M7hd4T -- protecting SPARQL endpoints using RDF based 
entity relationship semantics
3. http://bit.ly/UuWZSI -- collection of posts about ACLs and Data 
Access policies.



Kingsley
>
> On 05/28/2013 04:54 PM, Jim McCusker wrote:
>> I can see asking for an API key for working with computational 
>> resources (like Annotator and Ontology Recommender), but we don't 
>> need an API key to see those classes in HTML, why should we need one 
>> to see them in RDF?
>>
>> Jim
>>
>>
>> On Tue, May 28, 2013 at 4:07 PM, Peter Ansell <ansell.peter@gmail.com 
>> <mailto:ansell.peter@gmail.com>> wrote:
>>
>>     Hi Kingsley,
>>
>>     I think you may need an API key to work with them? [1]
>>
>>     Cheers,
>>
>>     Peter
>>
>>     [1] http://www.bioontology.org/wiki/index.php/NCBO_REST_services
>>
>>
>>     On 29 May 2013 05:55, Kingsley Idehen <kidehen@openlinksw.com
>>     <mailto:kidehen@openlinksw.com>> wrote:
>>
>>         All,
>>
>>         Who are the folks responsible for URIs such as:
>>
>>         1. <http://purl.bioontology.org/ontology/NCIM/C0144157> ?
>>         2. <http://purl.bioontology.org/ontology/MSH/C010843> ?
>>
>>         I ask due to the following curl output:
>>
>>         HTTP/1.1 302 Moved Temporarily
>>         Date: Tue, 28 May 2013 19:46:48 GMT
>>         Server: 1060 NetKernel v3.3 - Powered by Jetty
>>         Location: http://bioportal.bioontology.org/virtual/1499/C0144157
>>         Content-Type: text/html; charset=iso-8859-1
>>         X-Purl: 2.0; http://localhost:8080
>>         Expires: Thu, 01 Jan 1970 00:00:00 GMT
>>         Content-Length: 287
>>         Connection: close
>>
>>         HTTP/1.1 404
>>         Date: Tue, 28 May 2013 19:46:48 GMT
>>         Server: Apache/2.2.15 (Red Hat)
>>         X-Powered-By: Phusion Passenger (mod_rails/mod_rack) 3.0.18
>>         Cache-Control: no-cache
>>         Set-Cookie: _bp_session=61cc2ee75b3abf041d7df4ada339ce68;
>>         domain=.bioontology.org <http://bioontology.org>; path=/;
>>         HttpOnly
>>         Content-Length: 6468
>>         Status: 404
>>         Connection: close
>>         Content-Type: */*; charset=utf-8
>>
>>         And:
>>
>>         curl -ILH "Accept: text/turtle"
>>         http://purl.bioontology.org/ontology/MSH/C010843
>>         HTTP/1.1 302 Moved Temporarily
>>         Date: Tue, 28 May 2013 19:54:21 GMT
>>         Server: 1060 NetKernel v3.3 - Powered by Jetty
>>         Location: http://bioportal.bioontology.org/virtual/1351/C010843
>>         Content-Type: text/html; charset=iso-8859-1
>>         X-Purl: 2.0; http://localhost:8080
>>         Expires: Thu, 01 Jan 1970 00:00:00 GMT
>>         Content-Length: 286
>>         Connection: close
>>
>>         HTTP/1.1 302
>>         Date: Tue, 28 May 2013 19:54:21 GMT
>>         Server: Apache/2.2.15 (Red Hat)
>>         X-Powered-By: Phusion Passenger (mod_rails/mod_rack) 3.0.18
>>         Cache-Control: no-cache
>>         X-Runtime: 12
>>         Set-Cookie: _bp_session=9889b1bed12d58172331ce1bbf42d516;
>>         domain=.bioontology.org <http://bioontology.org>; path=/;
>>         HttpOnly
>>         Location:
>>         http://bioportal.bioontology.org/visualize/46836/?conceptid=C010843
>>         Content-Length: 133
>>         Status: 302
>>         Vary: Accept-Encoding
>>         Connection: close
>>         Content-Type: text/html; charset=utf-8
>>
>>         HTTP/1.1 301
>>         Date: Tue, 28 May 2013 19:54:21 GMT
>>         Server: Apache/2.2.15 (Red Hat)
>>         X-Powered-By: Phusion Passenger (mod_rails/mod_rack) 3.0.18
>>         Cache-Control: no-cache
>>         X-Runtime: 17
>>         Set-Cookie: _bp_session=17e1fddfad5145ef1b6217dc6a76570c;
>>         domain=.bioontology.org <http://bioontology.org>; path=/;
>>         HttpOnly
>>         Location:
>>         http://bioportal.bioontology.org/ontologies/46836?p=terms&conceptid=C010843
>>         Content-Length: 145
>>         Status: 301
>>         Vary: Accept-Encoding
>>         Connection: close
>>         Content-Type: text/html; charset=utf-8
>>
>>         HTTP/1.1 200
>>         Date: Tue, 28 May 2013 19:54:21 GMT
>>         Server: Apache/2.2.15 (Red Hat)
>>         X-Powered-By: Phusion Passenger (mod_rails/mod_rack) 3.0.18
>>         X-Runtime: 149
>>         ETag: "2d0e7a20547ae7fa0b9fd221222016e6"
>>         Cache-Control: private, max-age=0, must-revalidate
>>         Set-Cookie: _bp_session=0770e84c6238dfdcc24bb8e0f65a8faf;
>>         domain=.bioontology.org <http://bioontology.org>; path=/;
>>         HttpOnly
>>         Content-Length: 93664
>>         Status: 200
>>         Vary: Accept-Encoding
>>         Connection: close
>>         Content-Type: text/html; charset=utf-8
>>
>>
>>
>>         -- 
>>
>>         Regards,
>>
>>         Kingsley Idehen
>>         Founder & CEO
>>         OpenLink Software
>>         Company Web: http://www.openlinksw.com
>>         Personal Weblog: http://www.openlinksw.com/blog/~kidehen
>>         <http://www.openlinksw.com/blog/%7Ekidehen>
>>         Twitter/Identi.ca handle: @kidehen
>>         Google+ Profile:
>>         https://plus.google.com/112399767740508618350/about
>>         LinkedIn Profile: http://www.linkedin.com/in/kidehen
>>
>>
>>
>>
>>
>>
>>
>>
>>
>> -- 
>> Jim McCusker
>> Programmer Analyst
>> Krauthammer Lab, Pathology Informatics
>> Yale School of Medicine
>> james.mccusker@yale.edu <mailto:james.mccusker@yale.edu> | (203) 785-4436
>> http://krauthammerlab.med.yale.edu
>>
>> PhD Student
>> Tetherless World Constellation
>> Rensselaer Polytechnic Institute
>> mccusj@cs.rpi.edu <mailto:mccusj@cs.rpi.edu>
>> http://tw.rpi.edu
>
>
> -- 
> Richard D Boyce, PhD
> Assistant Professor of Biomedical Informatics
> Faculty, Geriatric Pharmaceutical Outcomes and Gero-Informatics Research and Training Program
> Scholar, Comparative Effectiveness Research Program
> University of Pittsburgh
> rdb20@pitt.edu
> Office: 412-648-9219
> Twitter: @bhaapgh


-- 

Regards,

Kingsley Idehen	
Founder & CEO
OpenLink Software
Company Web: http://www.openlinksw.com
Personal Weblog: http://www.openlinksw.com/blog/~kidehen
Twitter/Identi.ca handle: @kidehen
Google+ Profile: https://plus.google.com/112399767740508618350/about
LinkedIn Profile: http://www.linkedin.com/in/kidehen

Received on Tuesday, 28 May 2013 22:23:24 UTC