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Re: Teleconference Reminder: Clinical Decision Support for Personalized Medicine

From: M. Scott Marshall <mscottmarshall@gmail.com>
Date: Thu, 12 Apr 2012 15:52:05 +0200
Message-ID: <CACHzV2OHW1-uuOPErWsBpjufdvyhiYo8gKzLhM0KkL-FZ-V5DQ@mail.gmail.com>
To: Matthias Samwald <matthias.samwald@meduniwien.ac.at>
Cc: public-semweb-lifesci@w3.org, Gökhan Karakülah <gokhanism@gmail.com>
Regrets - conflict.

-Scott
On Apr 12, 2012 3:43 PM, "Matthias Samwald" <
matthias.samwald@meduniwien.ac.at> wrote:

> **
> A a point of discussion for today's meeting, here is the source of an
> extension to TMO that describes the variants of the approx. 380 core
> pharmacogenomics biomarkers in dbSNP:
>
> http://code.google.com/p/translationalmedicineontology/source/browse/trunk/ontology/extensions/dbsnp_pharmacogenomics_core.ttl
>
> I created that file with a script that parses the output produced by the
> dbSNP batch query service at
> http://www.ncbi.nlm.nih.gov/projects/SNP/batchquery.html
>
> @EricP: The namespace for this extension is still not settled -- maybe we
> could use a W3C namespace as we did for the TMO ontology itself?
> @Michel: I tried to link to your Bio2RDF version of dbSNP, currently only
> via rdfs:seeAlso links to your dev server (the data still does not seem to
> be available on the public Bio2RDF server. We should try to do this
> properly as soon as possible.
>
>  - Matthias
>
>
>  *From:* Matthias Samwald <matthias.samwald@meduniwien.ac.at>
> *Sent:* Thursday, April 12, 2012 10:55 AM
> *To:* public-semweb-lifesci@w3.org
> *Cc:* Gökhan Karakülah <gokhanism@gmail.com>
> *Subject:* Teleconference Reminder: Clinical Decision Support for
> Personalized Medicine
>
>  Dear all,
>
> The CDS telecon today at 11am EST (17:00 Central European Time) will focus
> on advancing the "big pharmacogenomics paper" that some of us have been
> working on (trying to demonstrate RDF-based pharmacogenomics data
> integration and decision support). If you have pharmacogenomic data in RDF
> / Linked Data format, it would be great if you could join -- maybe we could
> integrate your data into our demo.
>
> Cheers,
> Matthias
>
> *''' Conference Details'''
> * Clinical Decision Support for Personalized Medicine
>  http://www.w3.org/wiki/HCLSIG/CDS
>
>  Date of Call: Thursday April 12 2012
>  Time of Call: 11:00am - 12:00pm ET
>  Dial-In #: +1.617.761.6200 (Cambridge, MA)
>  Dial-In #: +33.4.26.46.79.03 (Paris, France)
>  Dial-In #: +44.203.318.0479 (London, UK)
>  Participant Access Code: 4257 ("HCLS")
>  IRC Channel: irc.w3.org port 6665 channel #HCLS (see [
> http://www.w3.org/Project/IRC/ W3C IRC page] for details, or see [
> http://cgi.w3.org/member-bin/irc/irc.cgi Web IRC])
>  Mibbit quick start: Click on [
> http://www.mibbit.com/chat/?server=irc.w3.org:6665&channel=%23hclsmibbit] for instant IRC access
>  Duration: 1h
>  Convener: Matthias Samwald
>
> *''' Agenda'''
> ** Advancing the "big pharmacogenomics paper" that some of us have been
> working on (for pharmacogenomics data integration and RDF-based decision
> support).
> * Other topics suggested by participants.
>
>
>
Received on Thursday, 12 April 2012 13:52:36 GMT

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