- From: Chris Mungall <cjm@berkeleybop.org>
- Date: Thu, 16 Apr 2009 08:49:23 -0700
- To: "Matthias Samwald" <samwald@gmx.at>
- Cc: "public-semweb-lifesci" <public-semweb-lifesci@w3.org>
On Apr 16, 2009, at 4:06 AM, Matthias Samwald wrote: > __ DBpedia - OBO mapping __ > > I have created a script that generates a mapping between OBO > ontologies and DBpedia, based on cross-references to Wikipedia > contained in some OBO ontologies. This amounts to a meager ~430 > mapping relations. Wikipedia references do not seem to be that > popular in OBO ontologies after all. GO alone has ~800 -- think you must have missed some! > Further information, script and mapping file are available at: > http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/DBpedia_to_OBO_mapping > > Further OBO - DBpedia mappings will be based on NLP. > > __ Additions to HCLS knowledge base __ > > I have also added two new graphs to the DERI HCLS knowledge base. > One contains the OBO-DBpedia mapping described above, the other > contains the RDFa statements from the aTags pastebin, this graph is > updated from the changing source document periodically. > > See > http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/DERI_HCLS_KB > > The synchronisation with the aTags pastebin is accomplished with the > crawler feature [1] of Virtuoso. It periodically visits the HTML > page, reads the RDFa and updates the graph in the knowledge base. I > guess we could extend the use of this feature to other datasets > generated by HCLS IG participants and make updating the HCLS > knowledge base more dynamic than it currently is. > > [1] http://docs.openlinksw.com/virtuoso/rdfinsertmethods.html#rdfinsertmethodvirtuosocrawler > > Cheers, > Matthias Samwald > > DERI Galway, Ireland > http://deri.ie/ > > Konrad Lorenz Institute for Evolution & Cognition Research, Austria > http://kli.ac.at/ > > > >
Received on Thursday, 16 April 2009 15:50:18 UTC