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Re: Linked Data for ICD? OPCS-4?

From: Hugh Glaser <hg@ecs.soton.ac.uk>
Date: Mon, 5 Oct 2009 00:10:51 +0100
To: Oktie Hassanzadeh <oktie@cs.toronto.edu>
CC: Peter Ansell <ansell.peter@gmail.com>, Kingsley Idehen <kidehen@openlinksw.com>, "public-lod@w3.org" <public-lod@w3.org>, w3c semweb HCLS <public-semweb-lifesci@w3.org>, Anja Jentzsch <anja@anjeve.de>
Message-ID: <EMEW3|08bea6ebafd7b7e721e8ceaa882d062cl940B802hg|ecs.soton.ac.uk|CFA%hg@ecs.soton.ac.uk>
On 04/10/2009 23:48, "Oktie Hassanzadeh" <oktie@cs.toronto.edu> wrote:

> 
> On Sun, Oct 4, 2009 at 3:28 PM, Hugh Glaser <hg@ecs.soton.ac.uk> wrote:
>> On 04/10/2009 23:18, "Peter Ansell" <ansell.peter@gmail.com> wrote:
>> 
>>> 2009/10/5 Hugh Glaser <hg@ecs.soton.ac.uk>:
>>>> Sorry, should have given an example:
>>>> http://www4.wiwiss.fu-berlin.de/drugbank/page/drugs/DB00588
>>> 
>>> There is also the issue that the dbpedia URI's are not the same as the
>>> ones everyone else is using. Ie, http://www.dbpedia.org/ URI's are
>>> quite distinct from http://dbpedia.org/ URI's that everyone else
>>> including DBpedia use. A similar URI structure situation exists with
>>> some erroneous references to symbol.bio2rdf.org <http://symbol.bio2rdf.org>
>>> that were a temporary
>>> experiment that has now been fixed to reference bio2rdf.org
>>> <http://bio2rdf.org>  instead.
>>> http://www4.wiwiss.fu-berlin.de/diseasome/page/genes/AAS
>>> 
>>> These mappings are all defined in a configuration file right?
>>> Shouldn't be too hard to fix these and reload the server?
>> Possibly.
>> But it doesn't make much difference, since linkedct has the same things:
>> http://data.linkedct.org/page/intervention/5580
>> owl:sameAs
>> http://data.linkedct.org/page/intervention/5633
>> Etc.
>> because they are both owl:sameAs
>> http://www4.wiwiss.fu-berlin.de/drugbank/resource/drugs/DB00588
>> 
> 
> Both the interventions above talk about the same drug,  Fluticasone Propionate
> (http://data.linkedct.org/page/intervention/5633) and Flixotide
> (http://data.linkedct.org/page/intervention/5580) are the same drug according
> to our source of semantic knowledge about drug names.
> 
> But, the interventions are different entities (they might have different dose
> or other attributes) that's why they are not linked with owl:SameAs. On the
> LinkedCT side, they are linked to the related drugs on drugbank with
> rdfs:seeAlso.
Hi Oktie,
As they should be.
My abject apologies - I could have sworn they had sameAs have an hour ago.
My eyes are getting old.
You haven't just changed them have you? :-)
Best
Hugh
> 
> On the drugbank side however these links should be fixed, also the links to
> dbpedia and bio2rdf should be fixed as pointed out by Peter. I'm CC'ing Anja
> who maintains the dataset, hopefully she can fix it soon.
> 
> 
> Regards,
> Oktie
> 
> 
> 
> 
>  
>> I love the Semantic Web :-)
>> 
>> Cheers
>> Hugh
>>> 
>>> Cheers,
>>> 
>>> Peter
>> 
>> 
> 
> 
Received on Sunday, 4 October 2009 23:12:02 UTC

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