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Re: Dataset descriptions

From: Michel Dumontier <michel.dumontier@gmail.com>
Date: Fri, 27 Feb 2015 13:58:49 -0500
Message-ID: <CALcEXf6McFksp3Hqz4TnjervvgMMmaD0+=JPXK0pmqQJgoQ9xA@mail.gmail.com>
To: Peter.Winstanley@scotland.gsi.gov.uk
Cc: Alasdair Gray <A.J.G.Gray@hw.ac.uk>, w3c semweb hcls <public-semweb-lifesci@w3.org>
Hi!
  I've recorded this as an issue in our github repo

https://github.com/joejimbo/HCLSDatasetDescriptions/issues/112

m.


Michel Dumontier
Associate Professor of Medicine (Biomedical Informatics), Stanford
University
Chair, W3C Semantic Web for Health Care and the Life Sciences Interest Group
http://dumontierlab.com

On Fri, Feb 27, 2015 at 9:06 AM, <Peter.Winstanley@scotland.gsi.gov.uk>
wrote:

>  Hi Alasdair
>
> It would be useful to have something that I can work with in
> Protégé/TopBraid.  It would also be reassuring to double-check all the
> inferences so that I could confirm that the aggregated set of properties
> and classes in the current model were consistent.  In addition it would
> provide a useful route to the development of additional modular ontologies
> if I could import the HCLS Dataset model as a single file.
>
> Peter
>
>
>
> *From:* Gray, Alasdair J G [mailto:A.J.G.Gray@hw.ac.uk]
> *Sent:* 27 February 2015 13:57
> *To:* Winstanley FP (Peter)
> *Cc:* public-semweb-lifesci@w3.org
> *Subject:* Re: Dataset descriptions
>
>
>
>
>
>  On 27 Feb 2015, at 13:51, Gray, Alasdair J G <A.J.G.Gray@hw.ac.uk> wrote:
>
>
>
> Hi Peter
>
>
>
> We do not have an OWL file.
>
>   We currently do now have an OWL file, the only descriptions exist as
> the table in the HTML document and a hopefully equivalent ShEx.
>
>
>
> Would you be looking for an OWL file containing just the properties that
> we are using from the other ontologies? What would you be looking to do
> with the OWL file?
>
>
>
> Best regards
>
>
>
> Alasdair
>
>
>
>  On 27 Feb 2015, at 10:31, Peter.Winstanley@scotland.gsi.gov.uk wrote:
>
>
>
> Hi Alasdair
>
> I’ve been looking for an ontology file for the HCLS dataset description
> but haven’t found it yet.  Is there one publicly available please?
>
> Peter
>
>
>
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> Alasdair J G Gray
>
> Lecturer in Computer Science, Heriot-Watt University, UK.
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Received on Friday, 27 February 2015 18:59:37 UTC

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