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Re: availabilty of dailymed and diseasome

From: Umutcan ŞİMŞEK <s.umutcan@gmail.com>
Date: Wed, 20 Mar 2013 01:22:30 +0200
Message-ID: <5148F336.2070500@gmail.com>
To: public-semweb-lifesci@w3.org
Hi Richard,

Thank you first of all, secondly, the links from drugbank dataset to 
dailymed are old. I mean to old server. I don't know how to relate your 
triples to corresponding drugbank triples. I guess linking through 
activeingredient would be convenient but there is no uri as value of 
dailymed:activeIngredient available. From drugbank side, for instance, 
Naproxen has a few brandedDrug property triples, but I couldn't find any 
clue that can be counted as a connection to current working dailymed 
dataset.

drugbank:brandedDrug 
<http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugbank/brandedDrug> 
	<http://wifo5-04.informatik.uni-mannheim.de/dailymed/resource/drugs/1086>
drugbank:brandedDrug 
<http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugbank/brandedDrug> 
	<http://wifo5-04.informatik.uni-mannheim.de/dailymed/resource/drugs/1600>
drugbank:brandedDrug 
<http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugbank/brandedDrug> 
	<http://wifo5-04.informatik.uni-mannheim.de/dailymed/resource/drugs/2630>
drugbank:brandedDrug 
<http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugbank/brandedDrug> 
	<http://wifo5-04.informatik.uni-mannheim.de/dailymed/resource/drugs/3022>
drugbank:brandedDrug 
<http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugbank/brandedDrug> 
	<http://wifo5-04.informatik.uni-mannheim.de/dailymed/resource/drugs/3105>
drugbank:brandedDrug 
<http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugbank/brandedDrug> 
	<http://wifo5-04.informatik.uni-mannheim.de/dailymed/resource/drugs/3139>
drugbank:brandedDrug 
<http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugbank/brandedDrug> 
	<http://wifo5-04.informatik.uni-mannheim.de/dailymed/resource/drugs/3240>
drugbank:brandedDrug 
<http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugbank/brandedDrug> 
	<http://wifo5-04.informatik.uni-mannheim.de/dailymed/resource/drugs/352>
drugbank:brandedDrug 
<http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugbank/brandedDrug> 
	<http://wifo5-04.informatik.uni-mannheim.de/dailymed/resource/drugs/4199>
drugbank:brandedDrug 
<http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugbank/brandedDrug> 
	<http://wifo5-04.informatik.uni-mannheim.de/dailymed/resource/drugs/494>
drugbank:brandedDrug 
<http://wifo5-04.informatik.uni-mannheim.de/drugbank/resource/drugbank/brandedDrug> 
	<http://wifo5-04.informatik.uni-mannheim.de/dailymed/resource/drugs/705>


That one above is how drugbank represents naproxen.

And this is just only one of above from dailymed, which I cannot figure 
out where it goes.

http://dbmi-icode-01.dbmi.pitt.edu/linkedSPLs/page/structuredProductLabelMetadata/00051a01-1c2e-4abb-b04c-548401f822c6

Except the case I'm missing something, is there a quick way to link them 
appropriately? Maybe a conversion between mannheim's dailymed drug codes 
and setid of current dailymed?

Umutcan




On 19-03-2013 01:47, Richard Boyce wrote:
> Umatcan, LinkedSPls replaces LODD Dailymed which appears to be no 
> longer maintained. Can't say whats going on with diseaseome. -R
>
>
>
> On 03/18/2013 07:48 AM, Umutcan Şimşek wrote:
>> After movement of lodd datasets there were some availability issues. 
>> Some of them seems resolved but dailymed and diseasome seem 
>> unreachable. Is there another hosting of those datasets or dump files?
>>
>> -- 
>> Umutcan ŞİMŞEK
>>
>> Ege Üniversitesi Bilgisayar Mühendisliği 4. Sınıf
>> ARGEFAR İlaç Geliştirme ve Farmakokinetik Araştırma - Uygulama Merkezi
>> Bilgi Sistemi Koordinatörlüğü Ekip Sorumlusu
>>
>> ****
>>
>> Ege University Computer Engineering 4
>> ARGEFAR Drug Development and Pharmacokinetic Research - Application 
>> Center
>> IT Team Supervisor
>>
>
>
Received on Tuesday, 19 March 2013 23:23:02 UTC

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