Re: Links to downloadable Bio Dataset in RDF ?

Did you try 
Http://www.openphacts.org

Carole 

Sent from my iPhone

On 31 Aug 2013, at 16:03, "Andrea Splendiani" <andrea.splendiani@iscb.org> wrote:

> Hi,
> 
> thanks, this is going to be very useful.
> As for [2], last update was in December, several links seem broken.
> 
> In general, I have found several listing of datasets, including ad hoc sites as data.io. But then none provides a guarantee of being maintained, which defeat a bit the point of having a directory.
> Directories are not that successful for web information, but I was wondering whether in our (more restricted) domain there was some consensus/commitment to one.
> 
> best,
> Andrea
> 
> Il giorno 30/ago/2013, alle ore 13:05, Richard Boyce <rdb20@pitt.edu> ha scritto:
> 
>> Hi Andrea,
>> 
>> I maintain a resource of all US drug product labeling called LinkedSPLs <http://purl.org/net/linkedspls>. The resource is up to date and contains mappings to bio2rdf, drugbank, NDF-RT, ChEBI, and RxNorm. Drugs with clinical pharmacogenomic statements [1] are included in the FDAPharmgxTable graph (e.g., <http://dbmi-icode-01.dbmi.pitt.edu/linkedSPLs/page/FDAPharmgxTable/1>) with the biomarkers mapped to HGNC, PRO, and PharmGKB. You also might find [2] useful.
>> 
>> kind regards,
>> -Rich
>> 
>> 1. http://www.fda.gov/Drugs/ScienceResearch/ResearchAreas/Pharmacogenetics/ucm083378.htm
>> 
>> 2. http://www.w3.org/wiki/HCLSIG/LODD/Data
>> 
>> 
>> 
>> On 08/30/2013 07:40 AM, Andrea Splendiani wrote:
>>> Hi all,
>>> 
>>> I was looking for a few datasets to download in RDF (Mesh, Drugbank...), but when I google for it, I get a lot of indexes/resources (Data.io, w3c wiki, ckan,...) with broken links.
>>> Is there a directory which is known to be up2date ?
>>> 
>>> best,
>>> Andrea
>> 
>> 
>> -- 
>> Richard D Boyce, PhD
>> Assistant Professor of Biomedical Informatics
>> Faculty, Geriatric Pharmaceutical Outcomes and Gero-Informatics Research and Training Program
>> University of Pittsburgh
>> rdb20@pitt.edu
>> Office: 412-648-9219
>> Twitter: @bhaapgh
> 
> 

Received on Saturday, 31 August 2013 14:25:24 UTC