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Re: [lodd][biordf] New release of the TCM dataset

From: Jun Zhao <jun.zhao@zoo.ox.ac.uk>
Date: Wed, 06 May 2009 10:26:12 +0100
Message-ID: <4A0157B4.5060001@zoo.ox.ac.uk>
To: Kei Cheung <kei.cheung@yale.edu>
CC: public-semweb-lifesci hcls <public-semweb-lifesci@w3.org>
Hi Kei,

Thanks for the pointer. 

I think in the next step I would like to work together with Anja, to create a as complete as possible mapping, of TCM ingredients and herbs to DBpedia URIs.

cheers,

Jun

Kei Cheung wrote:
> Thanks for the effort, Jun.
> 
> I wonder how many of the herbs in the TCM dataset intersect with those 
> listed on the following wikipedia page: 
> http://en.wikipedia.org/wiki/Chinese_herbal_medicine. We may be able to 
> get additional information about the herbs from wikipedia/dbpedia ...
> 
> Cheers,
> 
> -Kei
> 
> Jun Zhao wrote:
> 
>> Dear all,
>>
>> I have created a new release of the TCM dataset. The RDF dump can be 
>> downloaded at [1].
>>
>> In this release, I have:
>>
>> * Updated URIs in the dataset with a new domain name: 
>> http://purl.org/net/tcm/tcm.lifescience.ntu.edu.tw
>>
>> * Updated the dataset with the statistic confidence value of the 
>> association between entities
>>
>> * Released the mapping of TCM gene names and their linking to Entrez 
>> gene ids
>> * Described the interlinking and provenance of the interlinking using 
>> the oddlinker vocabulary [2], part of the LinkedMDB project [3]. Help 
>> from Oktie Hassanzadeh (LinkedMDB) is greatly appreciated.
>>
>> Information about the source dataset can be found in the accompanying 
>> release note. If you are planning to host the dataset, I would really 
>> appreciate it if you would acknowledge the source data provider: 
>> http://tcm.lifescience.ntu.edu.tw/; and also, drop me a note.:)
>>
>> [1] 
>> http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup?action=AttachFile&do=get&target=TCMGeneDIT_RDF_Dataset_r2.tar.gz. 
>>
>> [2] http://data.linkedmdb.org/resource/oddlinker/
>> [3] http://www.linkedmdb.org/
>>
>> cheers,
>>
>> Jun
>>
> 
> 
Received on Wednesday, 6 May 2009 09:39:13 GMT

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