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Re: [lodd][biordf] New release of the TCM dataset

From: Jun Zhao <jun.zhao@zoo.ox.ac.uk>
Date: Tue, 05 May 2009 17:48:59 +0100
Message-ID: <4A006DFB.30304@zoo.ox.ac.uk>
To: Kingsley Idehen <kidehen@openlinksw.com>
CC: public-semweb-lifesci hcls <public-semweb-lifesci@w3.org>
Kingsley Idehen wrote:
> Jun Zhao wrote:
>> Dear all,
>>
>> I have created a new release of the TCM dataset. The RDF dump can be 
>> downloaded at [1].
>>
>> In this release, I have:
>>
>> * Updated URIs in the dataset with a new domain name: 
>> http://purl.org/net/tcm/tcm.lifescience.ntu.edu.tw
>>
>> * Updated the dataset with the statistic confidence value of the 
>> association between entities
>>
>> * Released the mapping of TCM gene names and their linking to Entrez 
>> gene ids
>> * Described the interlinking and provenance of the interlinking using 
>> the oddlinker vocabulary [2], part of the LinkedMDB project [3]. Help 
>> from Oktie Hassanzadeh (LinkedMDB) is greatly appreciated.
>>
>> Information about the source dataset can be found in the accompanying 
>> release note. If you are planning to host the dataset, I would really 
>> appreciate it if you would acknowledge the source data provider: 
>> http://tcm.lifescience.ntu.edu.tw/; and also, drop me a note.:)
>>
>> [1] 
>> http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup?action=AttachFile&do=get&target=TCMGeneDIT_RDF_Dataset_r2.tar.gz. 
>>
>> [2] http://data.linkedmdb.org/resource/oddlinker/
>> [3] http://www.linkedmdb.org/
>>
>> cheers,
>>
>> Jun
>>
>>
> Jun,

Hi Kingsley,
> 
> Download attempts are failing.

Really?

Strange. I tried a few times myself, and it all worked for me:( Please let me know if you still have problems. I will move the dump to somewhere else. Sorry about this:(
> 
> Also note, re. <http://lod.openlinksw.com> all data source providers are 
> attributed in a natural linked data way :-)

Because I am not the source data provider, so I was just being a bit more careful:)
> 
> Please add the download URI to: http://esw.w3.org/topic/DataSetRDFDumps .
> 
I updated the page. Nice to know our fly* datasets are documented there too. New release of them will come out soon too.


Jun
> 
> 
Received on Tuesday, 5 May 2009 16:49:34 GMT

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