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RE: BioRDF Brainstorming

From: Nigam Shah <nigam@stanford.edu>
Date: Mon, 11 Feb 2008 14:09:10 -0800
To: "'eric neumann'" <ekneumann@gmail.com>, "'Matthias Samwald'" <samwald@gmx.at>
Cc: "'Susie M Stephens'" <STEPHENS_SUSIE_M@lilly.com>, <public-semweb-lifesci@w3.org>
Message-ID: <000101c86cfa$bbe41550$33ac3ff0$@edu>
We (NCBO) can provide data tagged with UMLS CUIs. We don't have a URI
service for CUIs yet, but once bioportal in URI-fitted (by sometime in
march) we could have that.

 

Nigam.

 

From: public-semweb-lifesci-request@w3.org
[mailto:public-semweb-lifesci-request@w3.org] On Behalf Of eric
neumann
Sent: Monday, February 11, 2008 7:17 AM
To: Matthias Samwald
Cc: Susie M Stephens; public-semweb-lifesci@w3.org; Holger Stenzhorn
Subject: Re: BioRDF Brainstorming

 

 

I cannot make today's call, but I think it essential for any BioRDF
project to consider how to include currently used terminologies such
as those from UMLS. 

 

I don't know if Olivier Bodenreider has been on any of the calls
recently, but his proposed offer to mint uris from CUI (UMLS, MeSH,
etc) is something that would be of immense value for any of the listed
projects. This would help establish some examples of true linked
bio-data!

 

Eric

On Feb 11, 2008 9:58 AM, Matthias Samwald <samwald@gmx.at> wrote:


I have also added several ideas to the wiki page [1]:

* OBO Structured Digital Abstracts
* SIOC for Science
* OntoWiki and Semantic MediaWiki
* HCLS KB Decentralisation
* Define a simplified OWL-to-RDF mapping for a subset of OWL

Cheers,
Matthias Samwald
Semantic Web Company / DERI Galway / Yale Center for Medical
Informatics


[1] http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Brainstorming






 
Received on Monday, 11 February 2008 22:09:29 GMT

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