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New Rule Responder HCLS Use Case

From: Adrian Paschke <adrian.paschke@biotec.tu-dresden.de>
Date: Mon, 26 Nov 2007 11:52:12 +0100
To: "'Susie M Stephens'" <STEPHENS_SUSIE_M@LILLY.COM>, <public-semweb-lifesci@w3.org>
Message-Id: <20071126105204.576A270000DF@mailserver.biotec.tu-dresden.de>

Dear Susie,

Unfortunately, I can not participate in the HCLS RDF telecon today since I
will travel to a one-week REWERSE meeting later.

But I would like to announce a new Rule Responder use case for Health Care
and Life Science. 

http://ibis.in.tum.de/projects/paw/hcls/

This use case develops a rule-based eScience inference infrastructure in the
domain of Health Care and Life Science, which will dynamically integrate, by
the use of rules and common query languages, existing Web-based scientific
services and data sources. Following the idea of Web Services and Grid
infrastructures this use case addresses the problem of rule-based
heterogeneous data integration from Web sources/services and service
composition. That is, it provides semantic-enriched rule-based inference
(e.g. to implement expert decision logic) and dynamic access to web-based
service, e.g. the EMBL-EBI patent database
(http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-page+query+-id+3BCib1WGHAl) W3C
HCLS knowledge base (http://sw.neurocommons.org/2007/kb.html), SWAN
(http://swan.mindinformatics.org/), GoPubMed (http://www.gopubmed.org/).
Web-based service and data sources can be easily integrated using the rich
query built-ins of Prova for SQL, SPARQL, RDF Triples, RDFS/OWL DL
reasoning, XPath/XQuery.

I would be happy to give a demo about it in one of the next HCLS RDF
telecons, e.g. on December, 10th; if possible combined with the promised
demo about goPubMed (http://www.gopubmed.org/).

The Rule Responder architecture consists of four essential parts:

1. RuleML / Reaction RuleML as common platform-independent (PIM layer) rule
/ message interchange format:

http://ibis.in.tum.de/research/ReactionRuleML/
http://www.ruleml.org/

2. Prova as a rule-based message / process flow engine used to describe and
execute in a declarative rule-based way the flow of inbound/outbound
messages between rule inference endpoints (arbitrary rule engines /
inference services) 

http://www.prova.ws/

3. The Rule Responder middleware with an integrated enterprise service bus
used as communication middleware to transport messages over 30 different
transport protocols (such as JMS, HTTP, SOAP) and as Web-based object-broker
to install distributed inference services (rule engines).

http://responder.ruleml.org/

4. Arbitrary platform-specific rule engines (e.g. OO-jDrew, Prova etc.) (PSM
layer) deployed as inference services on the ESB to answer queries and
execute rules wrt to the local rule bases of the rule engines.




To learn more about the general ideas and goals of Rule Responder as
Pragmatic Agent/Service web on top of the Semantic Web see e.g.:

Paschke, A., Boley, H., Kozlenkov. A, Craig, B.: Rule Responder:
RuleML-Based Agents for Distributed Collaboration on the Pragmatic Web, 2nd
Internation Conference on the Pragmatic Web, Tilburg, Netherlands, October,
2007.
http://www.slideshare.net/pragmaticweb/icpw2007paschke
http://oro.open.ac.uk/9275/

To learn more about the use of Reaction RuleML and the technical
implementation see, e.g.
http://ibis.in.tum.de/research/ReactionRuleML/docs/vldb_eda-ps07.pdf


Use Cases see e.g.:

Health Care and Life Science:
Paschke, A.: Prova - A Distributed Semantic Web Rule Engine, W3C HCLS
Telecon Presentation, October, 15th, Telecon, 2007.
http://ibis.in.tum.de/projects/paw/docs/HCLS_2007.pdf
http://ibis.in.tum.de/projects/paw/hcls/

Expert Finder and Virtual Organizations:
Boley, H., Paschke, A.: Expert Querying and Redirection with Rule Responder,
2nd International ExpertFinder Workshop: FEWS2007 (Finding Experts on the
Web with Semantics), Busan, Korea, November 2007.
http://ibis.in.tum.de/projects/paw/ruleml-2007/
http://sunsite.informatik.rwth-aachen.de/Publications/CEUR-WS/Vol-290/paper0
1.pdf

Distributed Grid Inductive Logic Programming
Paschke, A., Schröder, M.: Inductive Logic Programming for Bio-Informatics
in Prova, VLDB 2007 Workshop on Data Mining on Bioinformatics, Vienna,
Austria, September, 2007
http://bio.informatics.indiana.edu/VLDB07/finalprogram/paschke-adrian.pdf
http://ibis.in.tum.de/projects/paw/ilp/

Complex Event Processing and Business Activity Monitoring:
Paschke, A.: "RuleML and Reaction RuleML as a Quasi Standard for Rule
Interchange– Standardization in the Area of Rules and CEP", 5th "Meet the
Experts – CEP, BPM, BAM, SOA, EDA", Regensburg, June, 2007
http://www.citt-online.com/downloads/exp5/RuleML_Experten_Treffen_Regensburg
2007.pdf

Rule Based Service Level Agreements
http://ibis.in.tum.de/projects/rbsla/index.php


Best regards,

Adrian Paschke


-----Ursprüngliche Nachricht-----
Von: public-semweb-lifesci-request@w3.org
[mailto:public-semweb-lifesci-request@w3.org] Im Auftrag von Susie M
Stephens
Gesendet: Sonntag, 25. November 2007 19:31
An: public-semweb-lifesci@w3.org
Betreff: BioRDF Telcon



Here's the reminder for Monday's BioRDF call.

Cheers,

Susie


== Conference Details ==
 * Date of Call: Monday November 26, 2007
 * Time of Call: 11:00am Eastern Time
 * Dial-In #: +1.617.761.6200 (Cambridge, MA)
 * Dial-In #: +33.4.89.06.34.99 (Nice, France)
 * Dial-In #: +44.117.370.6152 (Bristol, UK)
 * Participant Access Code: 246733 ("BIORDF")
 * IRC Channel: irc.w3.org port 6665 channel #BioRDF
 * Duration: ~1 hour
 * Convener: Susie Stephens
 * Scribe: Jonathan Rees

== Agenda ==
 * SenseLab Conversion into Access tables - Luis Marenco
 * SenseLab Conversion Documentation - Matthias
 * URI note - Jonathan
 * Knowledgebase extensions - Alan
 * KB Documentation - Alan
 * AOB
Received on Monday, 26 November 2007 10:53:34 GMT

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