Re: updated bams instance style model

Hi Luis,

Thanks for this! I'm starting to have a look...

In the following, owl:range should be owl:Class, I think.

<owl:ObjectProperty rdf:ID="Subiculum_ventral_part_stratum_radiatum- 
has">
   <rdfs:domain  
rdf:resource="#Subiculum_ventral_part_stratum_radiatum"/>
    <rdfs:range>
      <owl:Class>
        <owl:unionOf rdf:parseType="Collection">
         <owl:range rdf:about="#alpha2_subunit_nicotinic_receptor"/>
         <owl:range rdf:about="#sulfhydryl_oxidase"/>
         <owl:range rdf:about="#alpha4-2_subunit_nicotinic_receptor"/>
         <owl:range rdf:about="#alpha4-1_subunit_nicotinic_receptor"/>
      </owl:unionOf>
     </owl:Class>
   </rdfs:range>
</owl:ObjectProperty>

The class named "_" isn't defined - was this intended?

<owl:Class rdf:about="#BAMS-Atlases">
   <rdfs:subClassOf rdf:resource="#_" />
</owl:Class>

Also, BAMS-Atlases is class without subclasses or instances - was  
that your intention?

What's the idea behind making all the object properties, rather than,  
for instance a single has, has-target, etc?

-Alan


On Mar 15, 2007, at 2:50 PM, Luis Marenco wrote:

>
> Hi All,
>
> I helped Mihai Bota design the prototype BAMS xml protocol (for  
> anatomical data)
> for the purpose of facilitating export of its contents into  
> Ontology servers.
> (e.g.: QIS system. In very alpha version: http://os- 
> qis.med.yale.edu ), There
> some vocabularies and simple ontologies can be automatically  
> imported, mapped,
> and allowed to be exported in several experimental protocols.
>
>
> For Bams, an Owl dump can be accessed at
> http://os-qis.med.yale.edu/site/tools/export/owl_export2.aspx?sid=22
>
> You can import this ontology directly into Protege following the  
> next steps
> . Select -> File\New Project
> . Check the box "[ ]Create from Existing sources"
> . Select Project type "OWL/RDF Files"
> . Click [next] button
> . Copy and paste
> "http://os-qis.med.yale.edu/site/tools/export/owl_export2.aspx?sid=22"
> . Click [Next >] button
> . Select "OWL DL"
> . Click [Next >] button
> . Select "Logic View"
> . Click [Finish] button
>
>
> Use the same stpes to import an old ontology version of NeuronDB
> http://os-qis.med.yale.edu/site/tools/export/owl_export2.aspx?sid=9
>
> ModelDB
> http://os-qis.med.yale.edu/site/tools/export/owl_export2.aspx?sid=19
>
> and others ...
>
> Thanks,
>
> ________________________
> Luis Marenco
> Yale Center for Medical Informatics
>
>
> -----Original Message-----
> From: public-semweb-lifesci-request@w3.org
> [mailto:public-semweb-lifesci-request@w3.org] On Behalf Of John  
> Barkley
> Sent: Thursday, March 15, 2007 2:22 PM
> To: public-semweb-lifesci@w3.org
> Subject: updated bams instance style model
>
>
> I put the updated bams instance style model on the wiki page
> http://esw.w3.org/topic/HCLS/HCLSIG_DemoHomePage_HCLSIG_Demo
>
> The new version modifies the old version according to Alan's
> suggestions from tuesday's f2f.
>
> jb
>
>
>
>