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Re: cell types, brain regions mentioned in gensat

From: Alan Ruttenberg <alanruttenberg@gmail.com>
Date: Fri, 2 Mar 2007 09:18:35 -0500
Message-Id: <92816F7B-0679-476E-BE53-4DE88E34C3BF@gmail.com>
Cc: "'Bill Bug'" <William.Bug@DrexelMed.edu>, "'kc28 Cheung'" <kei.cheung@yale.edu>, "'June Kinoshita'" <junekino@media.mit.edu>, "'Donald Doherty'" <donald.doherty@brainstage.com>, <public-semweb-lifesci@w3.org>
To: <wonglabow@verizon.net>

Hi Gwen,
The excel file was just brain regions from the ABA.
The other two lists (in the body of the email) were from gensat, one  
a list of cell types, one a list of regions (mostly brain).
We'll need an ontology of brain regions, then a mapping from the ABA  
list and the Gensat list (and any other sources we will integrate) to  
that ontology.
We'll also need an ontology of cell types and similar mapping from  
gensat, and other sources (senselab) to that ontology.
-Alan


On Mar 2, 2007, at 9:05 AM, Gwen Wong wrote:

> Hi all,
> Sorry Alan I could not find a list of neuron cell types?  The list  
> in the
> Excel table is not a set of neuronal cell types, but brain  
> regions.  The
> list does need cleaning up a bit, (misspelled raphe) but overall,  
> it's a
> highly detailed list of discrete brain structures and regions that  
> uses
> conventional terminology.  (ie. Any brain atlas will share most of  
> these
> names).
> Gwen
>
Received on Friday, 2 March 2007 14:19:34 GMT

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