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Re: use case draft____RE: [BIONT-DSE] Clinical Observations Interoperability Telcon August 28th, Tuesday 11:00am - 12:00pm US EDT

From: Alan Ruttenberg <alanruttenberg@gmail.com>
Date: Mon, 27 Aug 2007 15:18:10 -0400
Message-Id: <119D7F66-62A2-4367-8147-E7FE2ABF1076@gmail.com>
Cc: "Kashyap, Vipul" <VKASHYAP1@PARTNERS.ORG>, <public-semweb-lifesci@w3.org>, <public-hcls-dse@w3.org>, "Stanley Huff" <Stan.Huff@intermountainmail.org>, "Yan Heras" <Yan.Heras@intermountainmail.org>, "Oniki, Tom \(GE Healthcare, consultant\)" <Tom.Oniki@ge.com>, "Joey Coyle" <joey@xcoyle.com>, "Landen Bain" <lbain@topsailtech.com>, "Bron W. Kisler" <bkisler@earthlink.net>, "Eric Neumann" <eneumann@teranode.com>
To: Rachel Richesson <Rachel.Richesson@epi.usf.edu>

In case it's of interest, I did a small prototype of how one might  
evaluate the sort of criteria, in OWL, that Rachel describes in her  
attachment. The post about it is here:

http://lists.w3.org/Archives/Public/public-semweb-lifesci/2007Feb/ 
0076.html

Subject: counted inclusion + exclusion criteria in OWL

This only addresses the technical issue of how to write the rule. It  
doesn't questions of necessary vocabulary, that would be needed to  
handle the use case Rachel suggests, just how to put them together  
once you have it.

Regards,
Alan

On Aug 27, 2007, at 2:16 PM, Rachel Richesson wrote:

>
>
> I am attaching some background information on the use case for  
> discussion on tomorrow at 11 eastern.
>
>
>
> I will do my best to lead the call and get feedback on the context  
> of the use case, and the constructs that might be of most interest.  
> The attached document describes the idea of querying EMR data for  
> patients potentially eligible for a given research protocol, and  
> includes the eligibility criteria from 3 breast cancer studies that  
> are listed on ClinicalTrials.gov. These examples illustrate the  
> many constructs (lab, findings, history, procedures, diagnosis,  
> mutation….) that are found in “eligibility” criteria, which is a  
> big challenge for the group. I think some discussion and consensus  
> from the group will help to focus a general use case over the next  
> few weeks.
>
> I hope that Landen and Bron (from CDISC) can then elaborate on  
> which CDISC standards might be most applicable here, and perhaps  
> see how this context relates to an earlier demo on EMR-CDISC  
> harmonization that was conducted at HIMSS last year.
>
>
>
>
>
> Thanks,
> Rachel
>
>
>
>
>
> From: public-semweb-lifesci-request@w3.org [mailto:public-semweb- 
> lifesci-request@w3.org] On Behalf Of Kashyap, Vipul
> Sent: Monday, August 27, 2007 9:56 AM
> To: public-semweb-lifesci@w3.org; public-hcls-dse@w3.org
> Cc: Stanley Huff; Yan Heras; Oniki, Tom (GE Healthcare,  
> consultant); Joey Coyle; Landen Bain; Bron W. Kisler; Eric Neumann
> Subject: [BIONT-DSE] Clinical Observations Interoperability Telcon  
> August 28th, Tuesday 11:00am - 12:00pm US EDT
>
>
>
> Clinical Observations Interoperability Telcon
>
>
>
> http://esw.w3.org/topic/HCLS/OntologyTaskForce/BIONTDSEDCM
>
>
>
> Date and Time:
>
> August 28th, Tuesday 11:00am – 12:00pm US EDT
>
>
>
> Agenda:
>
> 1.                   Presentation and Discussion of Use Case:  
> Rachel Richesson
>
> 2.                   Presentation of CDISC Standards and Activities  
> Relevant to this Activity – Landen Bain (CDISC liaison for Healthcare)
>
>
>
> Telcon Details:
>
>
>
> Phone
>
> +1 617 761 6200, conference 24668 ("BIONT")
>
> IRC
>
> irc://irc.w3.org:6665/hcls
>
> Browser-based IRC client
>
> http://www.w3.org/2001/01/cgi-irc
>
>
>
>
>
> Feel free to annotate wiki page above with feedback and suggestions.
>
>
>
> Cheers,
>
>
>
> ---Vipul
>
>
>
> =======================================
>
> Vipul Kashyap, Ph.D.
>
> Senior Medical Informatician
>
> Clinical Informatics R&D, Partners HealthCare System
>
> Phone: (781)416-9254
>
> Cell: (617)943-7120
>
> http://www.partners.org/cird/AboutUs.asp?cBox=Staff&stAb=vik
>
>
>
> To keep up you need the right answers; to get ahead you need the  
> right questions
>
> ---John Browning and Spencer Reiss, Wired 6.04.95
>
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> <use case background_W3C Life Sciences_8-27-07.doc>
Received on Monday, 27 August 2007 19:18:23 GMT

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